HHsearch alignment for GI: 254780616 and conserved domain: PRK13425
>PRK13425 F0F1 ATP synthase subunit gamma; Provisional.
Probab=100.00 E-value=0 Score=605.45 Aligned_cols=286 Identities=31% Similarity=0.504 Sum_probs=258.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 98879999999987568999999999999999999999983023699999999999730157544210002443334325
Q gi|254780616|r 1 MTSLKEFKSRIHSVKETQKITEAMQLISVTKLRRAKEAIQNASSYQFHIKDFFMKCVVGEHFQEYPSPFVRGTGKDKVYL 80 (294)
Q Consensus 1 M~~lk~ik~RI~sv~~~~KITkaMkmVA~skl~ka~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (294)
T Consensus 1 Maslkeik~RI~Sv~st~KITkAMkmVAasKlrkaq~~~~~~r~Y~~~i~~~~~~l~~~~--~~~~~p~l~~~~~~~~~~ 78 (291)
T PRK13425 1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSAKV--DTSLNPLLSPRSEVNKVL 78 (291)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCEEE
T ss_conf 988799999999876889999999999999999999999954609999999999998508--764352001456787289
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHHH---HCCCCEEEEEEECHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHH
Q ss_conf 531146424420011479999999876532---03885038887040379851023332011111477664036889999
Q gi|254780616|r 81 LVICTAEKGLCGGFNAQIIRFARDRIKEFI---AEGKEIKLLIIGRKGYEGLRKEFSSMIIDSIELSSKKGVDFVQAHGI 157 (294)
Q Consensus 81 ~IvitSDrGLCG~~Ns~i~k~~~~~i~~~~---~~~~~~~l~~vGkKg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 157 (294)
T Consensus 79 ~IvitSDrGLCG~fNsni~k~~~~~i~~~~~~~~~~~~~~li~vG~Kg~~~~~~~~~~i~~~~~~~~--~~~~~~~a~~i 156 (291)
T PRK13425 79 VILITSDRGLCGAFNTNIIKLAQKVIHEDYAALHAKGGVSMICAGTRGFDFFRKRGYNIVKGYPGVF--QNLDFSVAKEI 156 (291)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCEEECCCCCC--CCCCHHHHHHH
T ss_conf 9997089764320128999999999998889762389879999507889999985996154057866--79999999999
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 97655765067875058862011344322204420478873542211003655432247996787899999899999999
Q gi|254780616|r 158 ARQITSLFTSNVFDLCFFIYSEFKSIIQQIPIISKIIPVDWSQDLEQKQQDILSVYRYESTLYSVLDDIVLRSISSRVFW 237 (294)
Q Consensus 158 ~~~l~~~~~~~~~d~v~iiYn~f~s~~~q~p~~~~llP~~~~~~~~~~~~~~~~~~~~Ep~~~~il~~l~~~yl~~~l~~ 237 (294)
T Consensus 157 ~~~~~~~~~~g~~d~v~iiyn~f~s~~~q~~~~~~llPi~~~~~~----~~~~~~~~~Ep~~~~vl~~l~~~yl~~~ly~ 232 (291)
T PRK13425 157 AETASGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPITPEKPG----AEGGSDYIYEPSPAAIIDELVPKHLNTQVWR 232 (291)
T ss_pred HHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCC----CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999999885489873899722254343252467760477842000----0136666357887889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999999999989999999999999998988988999998525319
Q gi|254780616|r 238 IILENKASEVGARITAMDNATRNAGQMVDNLVLSYNRQRQMRITTELIEIIAGAEVV 294 (294)
Q Consensus 238 alles~aSE~aaRm~AM~~At~Na~~~i~~L~l~~Nk~RQ~~IT~El~EIisGaeAl 294 (294)
T Consensus 233 al~es~aSE~aaRm~AM~~At~Na~eli~~L~l~yNr~RQa~IT~EL~EIvsGaeAl 289 (291)
T PRK13425 233 MMLESNAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADAL 289 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999979999999999999998998899999999879872