HHsearch alignment of GI: 254780616 and MMDB domain: 2qe7_G_

>2qe7_G (G:) ATP synthase subunit gamma; blockage of ATP hydrolysis, F1-ATPase, single particle analysis, thermoalkaliphilic, hydrolase; 3.06A {Bacillus SP}
Probab=100.00  E-value=0  Score=541.80  Aligned_cols=285  Identities=33%  Similarity=0.533  Sum_probs=260.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             98879999999987568999999999999999999999983023699999999999730157544210002443334325
Q gi|254780616|r    1 MTSLKEFKSRIHSVKETQKITEAMQLISVTKLRRAKEAIQNASSYQFHIKDFFMKCVVGEHFQEYPSPFVRGTGKDKVYL   80 (294)
Q Consensus         1 M~~lk~ik~RI~sv~~~~KITkaMkmVA~skl~ka~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (294)
                      ||||++|++||+|+++|+|||+||+|||++|++|+|++++..+||+..+.+++.+++..  ..+..+|+...++. ++.+
T Consensus         1 M~~lk~ik~ri~si~~i~kIt~aMk~ia~skl~k~~~~~~~~~~y~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~l   77 (286)
T 2qe7_G            1 MQGMREIKRRIRSVKNTRQITKAMKMVAAAKLRRAQETAENARPYADKIKEVISSIAAG--TKDFSHPMLEARPV-KKTG   77 (286)
T ss_dssp             --CCSSSSHHHHHHHHHHHHHHHHHHHHHHHTTSTTTSSSSSSSSTTCC----------------CCSSCSCCCC-SSCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH--CCCCCCCCCCCCCC-CCEE
T ss_conf             99779999999998689999999999999999999999997132999999999999974--63533420014567-7448


Q ss_pred             EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf             53114642442001147999999987653203885038887040379851023332011111477664036889999976
Q gi|254780616|r   81 LVICTAEKGLCGGFNAQIIRFARDRIKEFIAEGKEIKLLIIGRKGYEGLRKEFSSMIIDSIELSSKKGVDFVQAHGIARQ  160 (294)
Q Consensus        81 ~IvitSDrGLCG~~Ns~i~k~~~~~i~~~~~~~~~~~l~~vGkKg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~  160 (294)
                      ||+|||||||||+||++++|.+.+++++...++.++.+++||+||.+++.+++.+....+....+  .++|..+..+.+.
T Consensus        78 ~IvitSdrGlCG~~N~~i~k~~~~~~~~~~~~~~~~~li~iG~k~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~  155 (286)
T 2qe7_G           78 YMVITSDRGLAGPYNANILRLVSKTIEERHQSKDEYVIFAVGRKGRDFFKKRGYPVVEEVTGISD--TPSLTEIQDIAQS  155 (286)
T ss_dssp             CCCCCCTTCCCTHHHHHHHTGGGTTTTSSCTTSSCCCCCCCSHHHHHHHHSSSSCCSCCCSCCCS--SCCSTTTHHHHHH
T ss_pred             EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHH
T ss_conf             99996797655641058999999987766403641256422103788876211147766520121--0328999999999


Q ss_pred             HHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             55765067875058862011344322204420478873542211003655432247996787899999899999999999
Q gi|254780616|r  161 ITSLFTSNVFDLCFFIYSEFKSIIQQIPIISKIIPVDWSQDLEQKQQDILSVYRYESTLYSVLDDIVLRSISSRVFWIIL  240 (294)
Q Consensus       161 l~~~~~~~~~d~v~iiYn~f~s~~~q~p~~~~llP~~~~~~~~~~~~~~~~~~~~Ep~~~~il~~l~~~yl~~~l~~all  240 (294)
                      +++.|.++++|+|+++||+|+|+++|+|.++++||++....    ..+..+.|.|||++++++++|+|.|+.+.||+|++
T Consensus       156 i~~~~~~~~~~~v~ivyn~~~~~~~~~~~~~~llP~~~~~~----~~~~~~~~~~ep~~~~il~~l~~~yl~~~l~~~l~  231 (286)
T 2qe7_G          156 AIGMFADETFDKLTIFYNEFVSPIVQRPVEKQLLPLTSEEV----LDGPVSAYEYEPDSESVLEVLLPKYAETLIYSALL  231 (286)
T ss_dssp             HHHHHSSSSCSCCCCCCCCCSBTTBCCCCCCCCSSCCC---------------------------CCCTTSSHHHHTTTT
T ss_pred             HHHHHHCCCCCCEEEEEECCCCCCCCHHHEECCCCHHHCCC----CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99875216787337886303345430110000342111001----24776661117888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             999999999999999999989999999999999998988988999998525319
Q gi|254780616|r  241 ENKASEVGARITAMDNATRNAGQMVDNLVLSYNRQRQMRITTELIEIIAGAEVV  294 (294)
Q Consensus       241 es~aSE~aaRm~AM~~At~Na~~~i~~L~l~~Nk~RQ~~IT~El~EIisGaeAl  294 (294)
                      ||++|||+|||+||++||+||+|++++|+++|||+||++||+||+|||||||||
T Consensus       232 es~~sE~~aRm~aM~~At~na~~~i~~L~~~yNr~RQ~~IT~El~EIisGaeal  285 (286)
T 2qe7_G          232 DAKASEFGARMTAMGNATDNATEMLETLTLQFNRARQAAITQEIAEIVAGANAL  285 (286)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTSCC-------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             999999999999999999989999999999999999999999999999989863