HHSEARCH alignment of GI: 254780616 and SCOP domain: d1fs0g_

Alignment
>d1fs0g_ c.49.2.1 (G:) ATP synthase (F1-ATPase), gamma subunit {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=412.76  Aligned_cols=230  Identities=23%  Similarity=0.419  Sum_probs=207.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
Q ss_conf             99999999999999999999983023699999999999730157544210002443334325531146424420011479
Q gi|254780616|r   19 KITEAMQLISVTKLRRAKEAIQNASSYQFHIKDFFMKCVVGEHFQEYPSPFVRGTGKDKVYLLVICTAEKGLCGGFNAQI   98 (294)
Q Consensus        19 KITkaMkmVA~skl~ka~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IvitSDrGLCG~~Ns~i   98 (294)
                      ||||||||||+|||||+|++++++|||++.+.+++.++...  ..+..+|++.+++.+ +.++|||||||||||+||++|
T Consensus         1 KITkAMkmVAasKl~kaq~~~~~~r~Y~~~~~~~l~~l~~~--~~~~~~~~~~~~~~~-~~~~ivitSDrGLCG~~Ns~i   77 (230)
T d1fs0g_           1 KITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHG--NLEYKHPYLEDRDVK-RVGYLVVSTDRGLCGGLNINL   77 (230)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCGGGSCCCCS-EEEEEEECCSSSCSTTHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCC-EEEEEEEECCCCCCCCCCHHH
T ss_conf             96788999999999999999995250999999999999833--854346433478877-189999965853445531138


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             99999987653203885038887040379851023332011111477664036889999976557650678750588620
Q gi|254780616|r   99 IRFARDRIKEFIAEGKEIKLLIIGRKGYEGLRKEFSSMIIDSIELSSKKGVDFVQAHGIARQITSLFTSNVFDLCFFIYS  178 (294)
Q Consensus        99 ~k~~~~~i~~~~~~~~~~~l~~vGkKg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~l~~~~~~~~~d~v~iiYn  178 (294)
                      +|.+.+++++...+|.++.+++||+||.+|+++++.+.+..+....+  .+++.++..|++.+++.|.++++|+|+++||
T Consensus        78 ~k~~~~~~~~~~~~~~~~~~~~vGkk~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~d~v~iiYn  155 (230)
T d1fs0g_          78 FKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGD--NPSLSELIGPVKVMLQAYDEGRLDKLYIVSN  155 (230)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEEESHHHHHHHHHHCCCEEEEECCCTT--CCCSHHHHHHHHHHHHHHHTTSCSCEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHCCCCEEEECCCCCC--CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf             99999987665405873168875333325777428832431246766--7458889889999999886288338999952


Q ss_pred             CCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             11344322204420478873542211003655432247996787899999899999999999999999999999999
Q gi|254780616|r  179 EFKSIIQQIPIISKIIPVDWSQDLEQKQQDILSVYRYESTLYSVLDDIVLRSISSRVFWIILENKASEVGARITAMD  255 (294)
Q Consensus       179 ~f~s~~~q~p~~~~llP~~~~~~~~~~~~~~~~~~~~Ep~~~~il~~l~~~yl~~~l~~alles~aSE~aaRm~AM~  255 (294)
                      +|+|+++|+|+.+++||++.....  ......++|+|||+++++|++|+|+|++++||+|++||.||||+|||+||+
T Consensus       156 ~f~s~~~q~p~~~~llP~~~~~~~--~~~~~~~~~~fEP~~~~vl~~l~~~yl~~~ly~allEs~aSE~aARm~AM~  230 (230)
T d1fs0g_         156 KFINTMSQVPTISQLLPLPASDDD--DLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMK  230 (230)
T ss_dssp             EEEETTEEEEEEEEEESCC---------CCCSCCCEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCEEEEEECCCCCCCC--CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             455534344122100023320012--234678885417899999999999999999999999999999999999668


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Pyruvate kinase C-terminal domain-like
superfamily: ATP synthase (F1-ATPase), gamma subunit
family: ATP synthase (F1-ATPase), gamma subunit
domain: ATP synthase (F1-ATPase), gamma subunit
species: Escherichia coli [TaxId: 562]