HHsearch alignment for GI: 254780617 and conserved domain: COG1155
>COG1155 NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion].
Probab=100.00 E-value=0 Score=503.74 Aligned_cols=410 Identities=21% Similarity=0.332 Sum_probs=351.5
Q ss_pred EEEEEEEECCEEEEECCCCCCCCCEEEEC-CCEEEEEEEECCCEEEEEEECCCCCCCCCCEEEECCCEEEEECCHHHHHC
Q ss_conf 35899982758999758887737479957-98189999205985999980586686789888977987886679469830
Q gi|254780617|r 28 IGRVLSIGDGIARVYGLNNIRAGEMVQFS-HGVYGMALNLEVDNVGVVILGSYKEISEGDIVKRTGRIVDVPVGLELLGR 106 (509)
Q Consensus 28 ~G~V~~V~~giv~v~GL~~a~~GElv~~~-~g~~G~Vi~l~~d~v~i~~l~~~~gI~~G~~V~~tg~~~~vpvG~~lLGR 106 (509)
T Consensus 2 ~G~i~~isGp~V~a~gm~~~~my~~v~Vg~~~L~gEiI~i~gd~a~iQVyE~T~Gi~~Ge~V~~Tg~pLsvELGPGll~~ 81 (588)
T COG1155 2 MGKIIRISGPVVVAEGMEGAKMYDVVKVGEMGLIGEIIRIEGNRATIQVYEDTAGIRPGEKVENTGRPLSVELGPGLLKS 81 (588)
T ss_pred CCEEEEEECCEEEEECCCCCCEEEEEEECCCCEEEEEEEEECCEEEEEEEEECCCCCCCCEEECCCCCEEEEECCCHHHH
T ss_conf 74699987779998057677417899975775058999985876899999605899999832127982278747547764
Q ss_pred CCCHHHCCCCCC--------------CCC---------------------------------------------------
Q ss_conf 003002314466--------------444---------------------------------------------------
Q gi|254780617|r 107 VVDALGNPIDGK--------------GPI--------------------------------------------------- 121 (509)
Q Consensus 107 VvD~lG~PlDg~--------------g~i--------------------------------------------------- 121 (509)
T Consensus 82 IyDGiQrPL~~i~e~sg~Fi~RGv~~p~Ldr~~kW~F~P~~~~Gd~V~~GdvlGtV~Et~~i~~imvpp~~~~~~v~~i~ 161 (588)
T COG1155 82 IYDGIQRPLDVIKETSGDFIARGLNPPALDRKKKWDFVPAVKKGDTVYPGDVLGTVQETSLITHRIMVPPGVSGKVTWIA 161 (588)
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCEEEEEECCCCCCEEEEEEE
T ss_conf 44311474799998740175457889988855520003466669875268548986067735799837887762899995
Q ss_pred -----------------------CCCCCCHHCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCHHH
Q ss_conf -----------------------544410010135773112660014441602331011115683365524778861158
Q gi|254780617|r 122 -----------------------KCEQRSCTEADAPGIIQRQSVCEPLSTGIKAIDSLIPIGRGQRELIIGDRKTGKTSI 178 (509)
Q Consensus 122 -----------------------~~~~~~~i~~~~p~~~~R~~i~~~l~TGI~~ID~l~pigrGQR~~I~g~~g~GKt~l 178 (509)
T Consensus 162 ~~G~ytv~d~ia~v~~~~g~~~~~m~~~WPVR~~rp-~~eKl~p~~Pl~TGqRviDt~FPvaKGGTaaiPGpFGsGKTV~ 240 (588)
T COG1155 162 EEGEYTVEDVIATVSTEGGEVDVQMMTTWPVRKARP-VKRKLPPEIPLVTGQRVIDTLFPVAKGGTAAVPGPFGSGKTVS 240 (588)
T ss_pred CCCCCEEEEEEEEEECCCCEEEEEEEEECCCCCCCC-CCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCEEH
T ss_conf 588715667999995279748788887266467764-1024898775212542310102111576512668888983752
Q ss_pred HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCC-------CCCCCEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 99999998863024667876069999516776789999985114-------67421158997288788899999887666
Q gi|254780617|r 179 ILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALED-------RGALSYSIVVVASASDPAPMQLLAPFAGC 251 (509)
Q Consensus 179 ~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~-------~~~~~~tvvv~a~a~~~~~~r~~ap~~a~ 251 (509)
T Consensus 241 q----------h~laK~sdadiVVyigCGERGNEmtevL~eFPeL~Dp~tg~~lm~RT~liaNTSnMPVAAREasIYtGi 310 (588)
T COG1155 241 Q----------HTLSKLADGDIVIYVGCGERGNEMTEVLQEFPELKDPNTGQPLMDRTVLIANTSNMPVAAREASIYTGI 310 (588)
T ss_pred H----------HHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 4----------356564068889998157765238999986866668999971200036762576661888664353223
Q ss_pred HHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC-C--CCEEEEEEEE
Q ss_conf 666754204688479961647899999875453037875433375200124678888750454458-8--7356753100
Q gi|254780617|r 252 AMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALG-A--GSLTALPVIE 328 (509)
Q Consensus 252 aiAEyfr~~G~~VLi~~Ddltr~A~a~reisl~~~~pp~~~gyp~~vf~~~s~l~ERa~~~~~~~g-~--GSiT~~~~v~ 328 (509)
T Consensus 311 TiaEY~RDmGy~v~lmADSTSRWAEAlREisgRleEmPgeegyPaYL~srlA~fYERaG~v~~~~~~~r~GsvtV~gaVS 390 (588)
T COG1155 311 TIAEYYRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLGSRLAEFYERAGRVRLVSPEERFGSITVIGAVS 390 (588)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCC
T ss_conf 19998876302567750138999999998733500288644441678999999998547234227886258999825778
Q ss_pred CCCCCCCCCHHHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCHHHCCCCCCCHHH-------HHHHHHHHHHHHHHHHHH
Q ss_conf 3676644311466885406169961501221026654334441220343438988-------775567888799887678
Q gi|254780617|r 329 TQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSRVGSAAQVKAM-------KQVSGAVKGELAQYREMS 401 (509)
Q Consensus 329 ~~~~D~~~~i~~~~~si~DG~i~l~~~l~~~g~~Paid~~~S~SRv~~~~~~~~~-------~~~a~~lr~~laqy~Ele 401 (509)
T Consensus 391 PpGGdfSEPVtq~Tlriv~vFw~Ld~~la~~rhfPaInwl~syS~Y~~~~~~~~~~~v~~~~~~~r~~a~~~Lq~e~elq 470 (588)
T COG1155 391 PPGGDFSEPVTQNTLRVVRVFWALDAALANRRHFPSINWLNSYSLYTEDLRSWYDENVSPEWGALRDQAMEILQRESELQ 470 (588)
T ss_pred CCCCCCCCCCCHHEEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998476521100355664200144453232376567377799989888877640258238999999999988779999
Q ss_pred HHHHH-HCC-CCHHHHHHHHHHHHHHH-HHCCCCCCCCC----HHHHHHHHHHH
Q ss_conf 79876-338-99899999999999999-96699988748----89999999998
Q gi|254780617|r 402 SFSKF-SSD-LDSSTQKFLSKGERLTE-LLKQPQFSPLA----MEEQVVMIFAG 448 (509)
Q Consensus 402 ~f~~f-gsd-lD~~t~~~l~rg~ri~e-~LkQ~~~~p~~----~~~qv~~l~a~ 448 (509)
T Consensus 471 eiv~lVG~eal~e~~~~il~va~~ire~fLqQnafd~vD~~~~~~kq~~mm~~i 524 (588)
T COG1155 471 EIVQLVGYDALPEKEKSILDVARIIREDFLQQNAFDEIDAYCSLRKQYLMLKAI 524 (588)
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 999985742366288899999999998887651567310138889999999999