HHsearch alignment for GI: 254780617 and conserved domain: COG2255
>COG2255 RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair].
Probab=94.15 E-value=0.083 Score=32.18 Aligned_cols=52 Identities=21% Similarity=0.212 Sum_probs=32.1
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCC
Q ss_conf 3655247788611589999999886302466787606999951677678999998511467
Q gi|254780617|r 164 RELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRG 224 (509)
Q Consensus 164 R~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~~~ 224 (509)
T Consensus 54 HvLl~GPPGlGKTTLA~-IIA~Emgvn~k~t--------sGp~leK~gDlaaiLt~Le~~D 105 (332)
T COG2255 54 HVLLFGPPGLGKTTLAH-IIANELGVNLKIT--------SGPALEKPGDLAAILTNLEEGD 105 (332)
T ss_pred EEEEECCCCCCHHHHHH-HHHHHHCCCEEEC--------CCCCCCCHHHHHHHHHCCCCCC
T ss_conf 47864799876888999-9999856773763--------6620157265999986398677