HHsearch alignment for GI: 254780617 and conserved domain: COG2256

>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair].

Probab=95.03  E-value=0.08  Score=32.33  Aligned_cols=79  Identities=18%  Similarity=0.181  Sum_probs=46.7

Q ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCH
Q ss_conf             68336552477886115899999998863024667876069999516776789999985114674211589972887888
Q gi|254780617|r  161 RGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGALSYSIVVVASASDPA  240 (509)
Q Consensus       161 rGQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~~~~~~~tvvv~a~a~~~~  240 (509)
T Consensus        47 ~l~SmIl~GPPG~GKTTlA--~liA~~~~-------~~f----~~--------------------------~sAv~~g--   85 (436)
T COG2256          47 HLHSMILWGPPGTGKTTLA--RLIAGTTN-------AAF----EA--------------------------LSAVTSG--   85 (436)
T ss_pred             CCCEEEEECCCCCCHHHHH--HHHHHHHC-------CCE----EE--------------------------ECCCCCC--
T ss_conf             9860577789998888999--99987617-------766----99--------------------------5152346--


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHH
Q ss_conf             9999988766666675420468847996164789999987545
Q gi|254780617|r  241 PMQLLAPFAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSL  283 (509)
Q Consensus       241 ~~r~~ap~~a~aiAEyfr~~G~~VLi~~Ddltr~A~a~reisl  283 (509)
T Consensus        86 vkdlr---~i~e~a~~~~~~gr~tiLflDEIHRfnK~QQD~lL  125 (436)
T COG2256          86 VKDLR---EIIEEARKNRLLGRRTILFLDEIHRFNKAQQDALL  125 (436)
T ss_pred             HHHHH---HHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHHHHH
T ss_conf             79999---99999999872588349987225333744565510