HHsearch alignment for GI: 254780617 and conserved domain: PRK00080
>PRK00080 ruvB Holliday junction DNA helicase RuvB; Reviewed.
Probab=92.39 E-value=0.25 Score=28.76 Aligned_cols=51 Identities=20% Similarity=0.195 Sum_probs=30.5
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCC
Q ss_conf 365524778861158999999988630246678760699995167767899999851146
Q gi|254780617|r 164 RELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDR 223 (509)
Q Consensus 164 R~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~~ 223 (509)
T Consensus 53 H~Ll~GPPGlGKTTLA~-iiA~E~~~~~~~--------tsGP~lek~~DL~~iLt~l~~~ 103 (328)
T PRK00080 53 HVLLYGPPGLGKTTLAN-IIANEMGVNIRI--------TSGPALEKAGDLAALLTNLEEG 103 (328)
T ss_pred CEEEECCCCCCHHHHHH-HHHHHHCCCCEE--------CCCCCCCCHHHHHHHHHHCCCC
T ss_conf 05765889988999999-999986888156--------2450016747899999608878