HHsearch alignment for GI: 254780617 and conserved domain: PRK00635
>PRK00635 excinuclease ABC subunit A; Provisional.
Probab=90.56 E-value=0.49 Score=26.59 Aligned_cols=37 Identities=30% Similarity=0.514 Sum_probs=31.9
Q ss_pred CCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 160233101111568336552477886115899999998
Q gi|254780617|r 148 TGIKAIDSLIPIGRGQRELIIGDRKTGKTSIILDTFLNQ 186 (509)
Q Consensus 148 TGI~~ID~l~pigrGQR~~I~g~~g~GKt~l~~~~I~nq 186 (509)
T Consensus 949 HNLKnIdv~IP--rnkLvViTGvSGSGKSSLAFDTLyAE 985 (1809)
T PRK00635 949 HNLKHIDLSLP--RNALTAITGPSASGKHSLVFDILYAA 985 (1809)
T ss_pred CCCCCCCCCCC--CCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 35566331467--98669997898886899999889999