HHsearch alignment for GI: 254780617 and conserved domain: PRK04195

Probab=90.95  E-value=0.77  Score=25.16  Aligned_cols=110  Identities=16%  Similarity=0.179  Sum_probs=51.3

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHH-HHHHHHHHCCCCCC---CEEEEEEECCCCCH
Q ss_conf             655247788611589999999886302466787606999951677678-99999851146742---11589972887888
Q gi|254780617|r  165 ELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSS-VARFVKALEDRGAL---SYSIVVVASASDPA  240 (509)
Q Consensus       165 ~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~e-v~~~~~~l~~~~~~---~~tvvv~a~a~~~~  240 (509)
T Consensus        43 lLL~GPpGvGKTT~a-~~lAk~~g~~--------viE-lNASD~R~~~~I~~~i~~~~~~~sl~~~~~KlIIlDEvD~l~  112 (403)
T PRK04195         43 LLLYGPPGVGKTSLA-HALANDYGWE--------VIE-LNASDQRTKDVIERVAGEASTSGSLFGAKRKLILLDEVDGIH  112 (403)
T ss_pred             EEEECCCCCCHHHHH-HHHHHHHCCC--------EEE-ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
T ss_conf             998893998799999-9999984998--------599-771011478999999998760688778873499963434457


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEEEEECH-HHHHHHHHHHHHHCC
Q ss_conf             9999988766666675420468847996164-789999987545303
Q gi|254780617|r  241 PMQLLAPFAGCAMGEYFRDNGYHALIAYDDL-QKHAVAYRQLSLLLR  286 (509)
Q Consensus       241 ~~r~~ap~~a~aiAEyfr~~G~~VLi~~Ddl-tr~A~a~reisl~~~  286 (509)
T Consensus       113 ~~~d~gg--~~al~~~ik~s~~PiIli~Nd~~~~~~~~lrs~c~~i~  157 (403)
T PRK04195        113 GNADRGG--VRAILEIIKKAKNPIILTANDPYDPSLRPLRNACLMIE  157 (403)
T ss_pred             CHHHHHH--HHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCC
T ss_conf             2444799--99999998548870899826845567177997661221