HHsearch alignment for GI: 254780617 and conserved domain: PRK04328
>PRK04328 hypothetical protein; Provisional.
Probab=98.36 E-value=9.5e-06 Score=60.79 Aligned_cols=186 Identities=19% Similarity=0.238 Sum_probs=105.1
Q ss_pred HHHHCCHHHHHCCCC--CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH-
Q ss_conf 144416023310111--15683365524778861158999999988630246678760699995167767899999851-
Q gi|254780617|r 144 EPLSTGIKAIDSLIP--IGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKAL- 220 (509)
Q Consensus 144 ~~l~TGI~~ID~l~p--igrGQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l- 220 (509)
T Consensus 4 eRv~TGI~gLD~lL~GGlp~gs~~Lv~G~pGtGKT~la~qFl~~g~~~G--------E~~lyis~eE~~~~l~~~~~~~G 75 (250)
T PRK04328 4 KRVKTGIPGMDEILYGGIPERNVVLLSGGPGTGKSIFSQQFLWNGLQMG--------EPGIYVALEEHPVQVRRNMAQFG 75 (250)
T ss_pred CEECCCCHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCC--------CCEEEEEEECCHHHHHHHHHHCC
T ss_conf 1103585667875159987996999982899998999999999998769--------97799997279999999999809
Q ss_pred ------CCCCCCCEEEEEEECCC----CCHHHHHHHH------HHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf ------14674211589972887----8889999988------7666666754204688479961647899999875453
Q gi|254780617|r 221 ------EDRGALSYSIVVVASAS----DPAPMQLLAP------FAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLL 284 (509)
Q Consensus 221 ------~~~~~~~~tvvv~a~a~----~~~~~r~~ap------~~a~aiAEyfr~~G~~VLi~~Ddltr~A~a~reisl~ 284 (509)
T Consensus 76 ~d~~~~~~~g~l---~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~-rvVIDSit~l~~-------- 143 (250)
T PRK04328 76 WDVRKYEEEGKF---AIVDAFTGGIGEAAEREKYVVKDPDDVRELIDVLRQAIRDIGAK-RVVIDSVSTLYL-------- 143 (250)
T ss_pred CCHHHHHHCCCE---EEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC-EEEEECCHHHHH--------
T ss_conf 986898656977---99851233334200000101368535999999999999851898-899937078774--------
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCC--CCCCHHHHHHHHHCCEEEEECCHHHHCCC
Q ss_conf 0378754333752001246788887504544588735675310036766--44311466885406169961501221026
Q gi|254780617|r 285 LRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGSLTALPVIETQVND--VSAYIPTNVISITDGQIFLETELFYQGIR 362 (509)
Q Consensus 285 ~~~pp~~~gyp~~vf~~~s~l~ERa~~~~~~~g~GSiT~~~~v~~~~~D--~~~~i~~~~~si~DG~i~l~~~l~~~g~~ 362 (509)
T Consensus 144 -~~~~~~r----~~l~~l~~~l~~~g----------~Ttll~~e~~~~~~~~~~~---~ve~~~DgvI~L~~~~~~~~~~ 205 (250)
T PRK04328 144 -TKPAVAR----SIVMQLKRVLAGLG----------CTSIFVSQVSVGERGFGGP---GVEHAVDGIIRLDLDEIDGELK 205 (250)
T ss_pred -CCHHHHH----HHHHHHHHHHHHCC----------CEEEEEECCCCCCCCCCCC---CEEEEEEEEEEEEEECCCCEEE
T ss_conf -5858899----99999999998689----------8699997100365666778---6589998999988871399799
Q ss_pred CCCCC
Q ss_conf 65433
Q gi|254780617|r 363 PAINI 367 (509)
Q Consensus 363 Paid~ 367 (509)
T Consensus 206 R~l~I 210 (250)
T PRK04328 206 RSLIV 210 (250)
T ss_pred EEEEE
T ss_conf 99999