HHsearch alignment for GI: 254780617 and conserved domain: PRK04328

>PRK04328 hypothetical protein; Provisional.
Probab=98.36  E-value=9.5e-06  Score=60.79  Aligned_cols=186  Identities=19%  Similarity=0.238  Sum_probs=105.1

Q ss_pred             HHHHCCHHHHHCCCC--CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH-
Q ss_conf             144416023310111--15683365524778861158999999988630246678760699995167767899999851-
Q gi|254780617|r  144 EPLSTGIKAIDSLIP--IGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKAL-  220 (509)
Q Consensus       144 ~~l~TGI~~ID~l~p--igrGQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l-  220 (509)
T Consensus         4 eRv~TGI~gLD~lL~GGlp~gs~~Lv~G~pGtGKT~la~qFl~~g~~~G--------E~~lyis~eE~~~~l~~~~~~~G   75 (250)
T PRK04328          4 KRVKTGIPGMDEILYGGIPERNVVLLSGGPGTGKSIFSQQFLWNGLQMG--------EPGIYVALEEHPVQVRRNMAQFG   75 (250)
T ss_pred             CEECCCCHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCC--------CCEEEEEEECCHHHHHHHHHHCC
T ss_conf             1103585667875159987996999982899998999999999998769--------97799997279999999999809


Q ss_pred             ------CCCCCCCEEEEEEECCC----CCHHHHHHHH------HHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf             ------14674211589972887----8889999988------7666666754204688479961647899999875453
Q gi|254780617|r  221 ------EDRGALSYSIVVVASAS----DPAPMQLLAP------FAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLL  284 (509)
Q Consensus       221 ------~~~~~~~~tvvv~a~a~----~~~~~r~~ap------~~a~aiAEyfr~~G~~VLi~~Ddltr~A~a~reisl~  284 (509)
T Consensus        76 ~d~~~~~~~g~l---~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~-rvVIDSit~l~~--------  143 (250)
T PRK04328         76 WDVRKYEEEGKF---AIVDAFTGGIGEAAEREKYVVKDPDDVRELIDVLRQAIRDIGAK-RVVIDSVSTLYL--------  143 (250)
T ss_pred             CCHHHHHHCCCE---EEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC-EEEEECCHHHHH--------
T ss_conf             986898656977---99851233334200000101368535999999999999851898-899937078774--------


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCC--CCCCHHHHHHHHHCCEEEEECCHHHHCCC
Q ss_conf             0378754333752001246788887504544588735675310036766--44311466885406169961501221026
Q gi|254780617|r  285 LRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGSLTALPVIETQVND--VSAYIPTNVISITDGQIFLETELFYQGIR  362 (509)
Q Consensus       285 ~~~pp~~~gyp~~vf~~~s~l~ERa~~~~~~~g~GSiT~~~~v~~~~~D--~~~~i~~~~~si~DG~i~l~~~l~~~g~~  362 (509)
T Consensus       144 -~~~~~~r----~~l~~l~~~l~~~g----------~Ttll~~e~~~~~~~~~~~---~ve~~~DgvI~L~~~~~~~~~~  205 (250)
T PRK04328        144 -TKPAVAR----SIVMQLKRVLAGLG----------CTSIFVSQVSVGERGFGGP---GVEHAVDGIIRLDLDEIDGELK  205 (250)
T ss_pred             -CCHHHHH----HHHHHHHHHHHHCC----------CEEEEEECCCCCCCCCCCC---CEEEEEEEEEEEEEECCCCEEE
T ss_conf             -5858899----99999999998689----------8699997100365666778---6589998999988871399799


Q ss_pred             CCCCC
Q ss_conf             65433
Q gi|254780617|r  363 PAINI  367 (509)
Q Consensus       363 Paid~  367 (509)
T Consensus       206 R~l~I  210 (250)
T PRK04328        206 RSLIV  210 (250)
T ss_pred             EEEEE
T ss_conf             99999