HHsearch alignment for GI: 254780617 and conserved domain: PRK05922
>PRK05922 type III secretion system ATPase; Validated.
Probab=100.00 E-value=0 Score=880.72 Aligned_cols=421 Identities=24% Similarity=0.343 Sum_probs=396.1
Q ss_pred HHHHHHHCCCCCCCEEEEEEEEEEECCEEEEECCCCCCCCCEEEECC----CEEEEEEEECCCEEEEEEECCCCCCCCCC
Q ss_conf 99999842455542010358999827589997588877374799579----81899992059859999805866867898
Q gi|254780617|r 11 ILRKRIKDFGNDSEFSEIGRVLSIGDGIARVYGLNNIRAGEMVQFSH----GVYGMALNLEVDNVGVVILGSYKEISEGD 86 (509)
Q Consensus 11 ~l~~~i~~~~~~~~~~~~G~V~~V~~giv~v~GL~~a~~GElv~~~~----g~~G~Vi~l~~d~v~i~~l~~~~gI~~G~ 86 (509)
T Consensus 6 ~~~~~~~~~~p---~r~~GrV~~V~G~~ie~~g~-~~~iGelc~I~~~~~~~i~aeVvgf~~~~~~l~p~~~~~Gi~~G~ 81 (434)
T PRK05922 6 EEKLLIHQWQP---YRECGLLSRVSGNLLEAQGL-SACLGELCQISLPKSPPILAEVIGFHNQTTLLMSLSPIHYVALGA 81 (434)
T ss_pred HHHHHHHHCCC---CEEEEEEEEEECEEEEEEEC-CCCCCCEEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCCCCCC
T ss_conf 78989872798---54467999996649999806-878798599981899878999998729979999777766789999
Q ss_pred EEEECCCEEEEECCHHHHHCCCCHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCEEE
Q ss_conf 88977987886679469830003002314466444544410010135773112660014441602331011115683365
Q gi|254780617|r 87 IVKRTGRIVDVPVGLELLGRVVDALGNPIDGKGPIKCEQRSCTEADAPGIIQRQSVCEPLSTGIKAIDSLIPIGRGQREL 166 (509)
Q Consensus 87 ~V~~tg~~~~vpvG~~lLGRVvD~lG~PlDg~g~i~~~~~~~i~~~~p~~~~R~~i~~~l~TGI~~ID~l~pigrGQR~~ 166 (509)
T Consensus 82 ~V~~~g~~~~v~vg~~lLGRVld~~G~PiDg~~~~~~~~~~~i~~~~p~p~~R~~i~e~L~TGIraID~l~pigrGQR~g 161 (434)
T PRK05922 82 EVLPLRRPPSLHLSDHLLGRVLDGFGNPLDGKEQLPKTHLKPLFSPPPSPMSRQPIQEIFPTGIKAIDAFLTLGKGQRIG 161 (434)
T ss_pred EEEECCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEECCCCCCCCCEEE
T ss_conf 99989998767768061465726884644899999987605245899482221688875547855673567724676777
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHH
Q ss_conf 52477886115899999998863024667876069999516776789999985114674211589972887888999998
Q gi|254780617|r 167 IIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGALSYSIVVVASASDPAPMQLLA 246 (509)
Q Consensus 167 I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~~~~~~~tvvv~a~a~~~~~~r~~a 246 (509)
T Consensus 162 If~g~GvGKt~Ll-~~ia~~---------~~~~v~V~alIGeR~rEv~efie~~~~~~~~~~tvvv~atsd~p~~~r~~a 231 (434)
T PRK05922 162 VFSEPGSGKSSLL-STIAKG---------SKSTINVIALIGERGREVREYIEQHKEGLKAQRTIIIASPAHETAPTKVIA 231 (434)
T ss_pred ECCCCCCCHHHHH-HHHHHC---------CCCCEEEEEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHH
T ss_conf 3079999789999-867653---------678759998455138999999998661345210378750377887888999
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEE
Q ss_conf 87666666754204688479961647899999875453037875433375200124678888750454458873567531
Q gi|254780617|r 247 PFAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGSLTALPV 326 (509)
Q Consensus 247 p~~a~aiAEyfr~~G~~VLi~~Ddltr~A~a~reisl~~~~pp~~~gyp~~vf~~~s~l~ERa~~~~~~~g~GSiT~~~~ 326 (509)
T Consensus 232 ~~~a~aiAEyfrd~G~~VLl~~Dsltr~A~A~REisl~~gepP~~~gYp~svf~~l~~L~ERag~~~----~GSITa~~t 307 (434)
T PRK05922 232 GRAAMTIAEYFRDQGHRVLFIMDSLSRWIAALQEVALARGETLSAHHYAASVFHHVSEFTERAGNND----KGSITALYA 307 (434)
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC----CCCCCEEEE
T ss_conf 9887679999997799679995478899999989998648999876889449998788886043799----965564989
Q ss_pred EECCCCCCCCCHHHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00367664431146688540616996150122102665433444122034343898877556788879988767879876
Q gi|254780617|r 327 IETQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSRVGSAAQVKAMKQVSGAVKGELAQYREMSSFSKF 406 (509)
Q Consensus 327 v~~~~~D~~~~i~~~~~si~DG~i~l~~~l~~~g~~Paid~~~S~SRv~~~~~~~~~~~~a~~lr~~laqy~Ele~f~~f 406 (509)
T Consensus 308 Vl~~~~~-~dpi~d~~~silDGhIvLsr~-~~~~~~PAIDvl~S~SR~~~~~~~~~h~~~a~~~r~~la~y~e~~dli~~ 385 (434)
T PRK05922 308 ILHYPNH-PDIFTDYLKSLLDGHFFLTPQ-GKALASPPIDILTSLSRSARQLALPHHYAAAEELRSLLKAYHEALDIIQL 385 (434)
T ss_pred EEECCCC-CCCCCCCCHHHEEEEEEECHH-HHHCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9853898-765677333022224675354-66157897565667645142335699999999999999999999999985
Q ss_pred HC---CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 33---8998999999999999999669998874889999999998669
Q gi|254780617|r 407 SS---DLDSSTQKFLSKGERLTELLKQPQFSPLAMEEQVVMIFAGISG 451 (509)
Q Consensus 407 gs---dlD~~t~~~l~rg~ri~e~LkQ~~~~p~~~~~qv~~l~a~~~G 451 (509)
T Consensus 386 G~y~~g~d~~~D~ai~~~~~i~~fL~Q~~~e~~~~~~t~~~l~~l~~~ 433 (434)
T PRK05922 386 GAYTPGQDAHLDRAVKLLPSIKQFLSQPLSSYCALHNTLKQLEALLKH 433 (434)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 297678876699999999999997189999973999999999998748