HHsearch alignment for GI: 254780617 and conserved domain: PRK06315
>PRK06315 type III secretion system ATPase; Provisional.
Probab=100.00 E-value=0 Score=902.66 Aligned_cols=430 Identities=25% Similarity=0.390 Sum_probs=400.5
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCEEEEECCCCCCCCCEEEECC----CEEEEEEEECCCEEEEEEECCCCC
Q ss_conf 9999999999842455542010358999827589997588877374799579----818999920598599998058668
Q gi|254780617|r 6 AEISDILRKRIKDFGNDSEFSEIGRVLSIGDGIARVYGLNNIRAGEMVQFSH----GVYGMALNLEVDNVGVVILGSYKE 81 (509)
Q Consensus 6 ~eis~~l~~~i~~~~~~~~~~~~G~V~~V~~giv~v~GL~~a~~GElv~~~~----g~~G~Vi~l~~d~v~i~~l~~~~g 81 (509)
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~GrV~~v~G~~ie~~g-~~~~iGelc~I~~~~~~~~~aEVVgf~~~~~~l~p~~~~~G 80 (442)
T PRK06315 2 DELTTDFDTLMSQLPDVQLTTVVGRITEVVGMLIKAVV-PDVRVGEVCLVKRHGMEPLVTEVVGFTQNFVFLSPLGELTG 80 (442)
T ss_pred CHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEE-CCCCCCCEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCC
T ss_conf 24566499999986138862135799999978999986-78986786899918997788999998499799998778767
Q ss_pred CCCCCEEEECCCEEEEECCHHHHHCCCCHHHCCCCC--CCCC-CCCCCCHHCCCCCCCCCCCCCHHHHHCCHHHHHCCCC
Q ss_conf 678988897798788667946983000300231446--6444-5444100101357731126600144416023310111
Q gi|254780617|r 82 ISEGDIVKRTGRIVDVPVGLELLGRVVDALGNPIDG--KGPI-KCEQRSCTEADAPGIIQRQSVCEPLSTGIKAIDSLIP 158 (509)
Q Consensus 82 I~~G~~V~~tg~~~~vpvG~~lLGRVvD~lG~PlDg--~g~i-~~~~~~~i~~~~p~~~~R~~i~~~l~TGI~~ID~l~p 158 (509)
T Consensus 81 i~~G~~V~~~g~~~~vpvg~~lLGRViD~~G~PiDg~~~gp~~~~~~~~pi~~~~p~p~~R~~i~epl~TGIraID~llp 160 (442)
T PRK06315 81 VSPSSEVIPTGLPLHIRAGNGLLGRVLNGLGEPIDTETKGPLENVDETYPIFRAPPDPLHRAKLRTILSTGVRCIDGMLT 160 (442)
T ss_pred CCCCCEEEECCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCCCCCCCCCEEECCCCC
T ss_conf 89999999689987787271513788888877667877788767763113247896934307878753368530011277
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCC
Q ss_conf 15683365524778861158999999988630246678760699995167767899999851146742115899728878
Q gi|254780617|r 159 IGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGALSYSIVVVASASD 238 (509)
Q Consensus 159 igrGQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~~~~~~~tvvv~a~a~~ 238 (509)
T Consensus 161 ig~GQR~gIfagsGvGKs~Ll-~~i~~~~~--------~adv~V~~lIGeRgrEv~efie~~~~~~~l~rsvvV~atsd~ 231 (442)
T PRK06315 161 VARGQRIGIFAGAGVGKSSLL-GMIARNAE--------EADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQ 231 (442)
T ss_pred CCCCCEEECCCCCCCCHHHHH-HHHHHHHC--------CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCC
T ss_conf 023777640389999888999-99997440--------389349999551137999999975201452133999617999
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 88999998876666667542046884799616478999998754530378754333752001246788887504544588
Q gi|254780617|r 239 PAPMQLLAPFAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGA 318 (509)
Q Consensus 239 ~~~~r~~ap~~a~aiAEyfr~~G~~VLi~~Ddltr~A~a~reisl~~~~pp~~~gyp~~vf~~~s~l~ERa~~~~~~~g~ 318 (509)
T Consensus 232 p~~~R~~a~~~A~aiAEyFrd~G~~VLl~~DslTR~A~A~REi~l~~gepP~~~GYppsvf~~l~~l~ERag~~~----~ 307 (442)
T PRK06315 232 SSQLRLNAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERAGASD----K 307 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCC----C
T ss_conf 878875558877789999986899489994370288889999997558999877868339988788887224889----9
Q ss_pred CCEEEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 73567531003676644311466885406169961501221026654334441220343438988775567888799887
Q gi|254780617|r 319 GSLTALPVIETQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSRVGSAAQVKAMKQVSGAVKGELAQYR 398 (509)
Q Consensus 319 GSiT~~~~v~~~~~D~~~~i~~~~~si~DG~i~l~~~l~~~g~~Paid~~~S~SRv~~~~~~~~~~~~a~~lr~~laqy~ 398 (509)
T Consensus 308 GSITa~~tVl~~gdD~~dPi~d~~~~ilDGhivLsr~la~~g~yPAIDvl~S~SR~~~~v~~~~h~~~a~~~r~~la~y~ 387 (442)
T PRK06315 308 GTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTAIVPEEQRRIIGKAREVLAKYK 387 (442)
T ss_pred CCEEEEEEEECCCCCCCCCCHHHHHHHCCCEEEECHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 74565334651588767873677787606169985879866999971875045336611057999999999999999889
Q ss_pred HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 6787987633---89989999999999999996699988748899999999986
Q gi|254780617|r 399 EMSSFSKFSS---DLDSSTQKFLSKGERLTELLKQPQFSPLAMEEQVVMIFAGI 449 (509)
Q Consensus 399 Ele~f~~fgs---dlD~~t~~~l~rg~ri~e~LkQ~~~~p~~~~~qv~~l~a~~ 449 (509)
T Consensus 388 e~edli~iG~y~~g~d~~~d~ai~~~~~i~~fL~Q~~~e~~~~~~~~~~l~~i~ 441 (442)
T PRK06315 388 ANEMLIRIGEYRRGSDREVDFAIDHIDKLNRFLKQDIHEKTNYEEAAQQLRAIF 441 (442)
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 999999962987899988999999799999982899889969999999999975