HHsearch alignment for GI: 254780617 and conserved domain: PRK06820

>PRK06820 type III secretion system ATPase; Validated.
Probab=100.00  E-value=0  Score=939.41  Aligned_cols=429  Identities=26%  Similarity=0.396  Sum_probs=403.6

Q ss_pred             CHHHHHHHHHHHHHCCCC-CCCEEEEEEEEEEECCEEEEECCCCCCCCCEEEEC-CCEEEEEEEECCCEEEEEEECCCCC
Q ss_conf             889999999999842455-54201035899982758999758887737479957-9818999920598599998058668
Q gi|254780617|r    4 HAAEISDILRKRIKDFGN-DSEFSEIGRVLSIGDGIARVYGLNNIRAGEMVQFS-HGVYGMALNLEVDNVGVVILGSYKE   81 (509)
Q Consensus         4 ~~~eis~~l~~~i~~~~~-~~~~~~~G~V~~V~~giv~v~GL~~a~~GElv~~~-~g~~G~Vi~l~~d~v~i~~l~~~~g   81 (509)
T Consensus         5 ~~~~~~~~~~~~~~~~~~p~~~vr~~G~V~~V~g~iv~~~-l~~~~~Gelc~i~~~g~~aeVv~~~~~~v~l~~~~~~~G   83 (445)
T PRK06820          5 DIARLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRAS-LPNVAQGELCRIEPQGMLAEVVSIEQEMALLSPFASSDG   83 (445)
T ss_pred             CHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECEEEEEE-CCCCCCCCEEEEECCCEEEEEEEEECCEEEEEECCCCCC
T ss_conf             3678999999874167999998466769999927699996-588784898999279989999998789799998878878


Q ss_pred             CCCCCEEEECCCEEEEECCHHHHHCCCCHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCC
Q ss_conf             67898889779878866794698300030023144664445444100101357731126600144416023310111156
Q gi|254780617|r   82 ISEGDIVKRTGRIVDVPVGLELLGRVVDALGNPIDGKGPIKCEQRSCTEADAPGIIQRQSVCEPLSTGIKAIDSLIPIGR  161 (509)
Q Consensus        82 I~~G~~V~~tg~~~~vpvG~~lLGRVvD~lG~PlDg~g~i~~~~~~~i~~~~p~~~~R~~i~~~l~TGI~~ID~l~pigr  161 (509)
T Consensus        84 i~~G~~V~~tG~~l~V~VG~~lLGRVvD~lG~PiDgg~-~~~~~~~pi~~~~p~p~~R~~i~~pL~TGIraID~l~pigr  162 (445)
T PRK06820         84 LRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP-PLTGQWRELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGE  162 (445)
T ss_pred             CCCCCEEEECCCCEEEECCCCCCCCEECCCCCCCCCCC-CCCCCEEECCCCCCCCHHCCCCCCCCCCCCEEEECCCCCCC
T ss_conf             89999999799960887282402787068875318998-87774320358996832026878511268546625677447


Q ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHH
Q ss_conf             83365524778861158999999988630246678760699995167767899999851146742115899728878889
Q gi|254780617|r  162 GQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGALSYSIVVVASASDPAP  241 (509)
Q Consensus       162 GQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~~~~~~~tvvv~a~a~~~~~  241 (509)
T Consensus       163 GQR~gIfgg~GvGKT~L-l~~i~~~~~---------adv~V~~~IGeRgrEv~efie~~~~~~~~~rtvvV~atsd~p~~  232 (445)
T PRK06820        163 GQRIGIFAAAGVGKSTL-LSMLCADSA---------ADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPAL  232 (445)
T ss_pred             CCCCEEECCCCCCCCHH-HHHHHHHCC---------CCEEEEEEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
T ss_conf             87421106899981223-445653067---------88799998744128999999986423761106999416768989


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf             99998876666667542046884799616478999998754530378754333752001246788887504544588735
Q gi|254780617|r  242 MQLLAPFAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGSL  321 (509)
Q Consensus       242 ~r~~ap~~a~aiAEyfr~~G~~VLi~~Ddltr~A~a~reisl~~~~pp~~~gyp~~vf~~~s~l~ERa~~~~~~~g~GSi  321 (509)
T Consensus       233 ~R~~a~~~a~aiAEyfrd~Gk~VLli~DslTr~A~A~REisl~~gepP~~~gYp~~vf~~l~~L~ERag~~~----~GSI  308 (445)
T PRK06820        233 ERLKGLSTATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSD----RGSI  308 (445)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC----CCCE
T ss_conf             999998761148899986798489984465788889989998647999767778549988888887304788----9756


Q ss_pred             EEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             67531003676644311466885406169961501221026654334441220343438988775567888799887678
Q gi|254780617|r  322 TALPVIETQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSRVGSAAQVKAMKQVSGAVKGELAQYREMS  401 (509)
Q Consensus       322 T~~~~v~~~~~D~~~~i~~~~~si~DG~i~l~~~l~~~g~~Paid~~~S~SRv~~~~~~~~~~~~a~~lr~~laqy~Ele  401 (509)
T Consensus       309 Tal~~V~~~~dD~tdpi~d~~~silDG~ivLsr~La~~g~yPAIDvl~SvSRv~~~~~~~~h~~~a~~~r~~la~y~e~e  388 (445)
T PRK06820        309 TAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRRMLACYQEIE  388 (445)
T ss_pred             EEEEEEEECCCCCCCCCHHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             77888970588767771676756515389984879866999981874056454622202999999999999999999999


Q ss_pred             HHHHHH---CCCCHHHHHHHHHHHHHHHHHCCCCC-----CCCCHHHHHHHHHHH
Q ss_conf             798763---38998999999999999999669998-----874889999999998
Q gi|254780617|r  402 SFSKFS---SDLDSSTQKFLSKGERLTELLKQPQF-----SPLAMEEQVVMIFAG  448 (509)
Q Consensus       402 ~f~~fg---sdlD~~t~~~l~rg~ri~e~LkQ~~~-----~p~~~~~qv~~l~a~  448 (509)
T Consensus       389 ~li~~G~y~~g~d~~~d~ai~~~~~i~~fL~Q~~~~~~~~~~~~~~~~~~~l~~~  443 (445)
T PRK06820        389 LLVQIGEYQAGEDLQADEALQRYPAICAFLQQDHSLTRDPDTAHLDTTLEHLAQV  443 (445)
T ss_pred             HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             9998478767999899999987899999858999888887777989999999986