HHsearch alignment for GI: 254780617 and conserved domain: PRK08181
>PRK08181 transposase; Validated.
Probab=91.33 E-value=0.21 Score=29.23 Aligned_cols=50 Identities=16% Similarity=0.276 Sum_probs=33.6
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCC
Q ss_conf 15683365524778861158999999988630246678760699995167767899999851146
Q gi|254780617|r 159 IGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDR 223 (509)
Q Consensus 159 igrGQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~~ 223 (509)
T Consensus 103 i~~~~Nvil~Gp~GtGKThLA~-Alg~~A~~~G-----~~V--~f~~-------~~~L~~~L~~a 152 (269)
T PRK08181 103 LAKGANLLLFGPPGGGKSHLAA-AIGLALIENG-----WRV--LFTR-------TTDLVQKLQVA 152 (269)
T ss_pred HHCCCEEEEECCCCCCHHHHHH-HHHHHHHHCC-----CEE--EEEE-------HHHHHHHHHHH
T ss_conf 8648708998999987889999-9999999879-----939--9978-------99999999997