HHsearch alignment for GI: 254780617 and conserved domain: PRK08840
>PRK08840 replicative DNA helicase; Provisional.
Probab=92.45 E-value=0.14 Score=30.48 Aligned_cols=43 Identities=16% Similarity=0.261 Sum_probs=34.6
Q ss_pred HHHCCHHHHHCCCC-CCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 44416023310111-15683365524778861158999999988
Q gi|254780617|r 145 PLSTGIKAIDSLIP-IGRGQRELIIGDRKTGKTSIILDTFLNQK 187 (509)
Q Consensus 145 ~l~TGI~~ID~l~p-igrGQR~~I~g~~g~GKt~l~~~~I~nq~ 187 (509)
T Consensus 199 Gi~TG~~~LD~~~~Gl~~G~LiviaaRPsmGKTalalnia~n~a 242 (464)
T PRK08840 199 GVSTGFTDLNKKTAGLQGSDLIIVAARPSMGKTTFAMNLCENAA 242 (464)
T ss_pred CCCCCHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 68889899987536987576799983798736899999999999