HHsearch alignment for GI: 254780617 and conserved domain: PRK12422
>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=96.59 E-value=0.073 Score=32.59 Aligned_cols=239 Identities=14% Similarity=0.199 Sum_probs=107.3
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHH
Q ss_conf 65524778861158999999988630246678760699995167767899999851146742115899728878889999
Q gi|254780617|r 165 ELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGALSYSIVVVASASDPAPMQL 244 (509)
Q Consensus 165 ~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~~~~~~~tvvv~a~a~~~~~~r~ 244 (509)
T Consensus 144 LfIyG~~GlGKTHL-L~AIgn~i~~-----~~~--kV~Yvta-e~F--~~~~v~ai~~~~----------------~~~F 196 (455)
T PRK12422 144 IYLFGPEGSGKTHL-MQAAVSALRE-----SGG--KILYVSS-ELF--TEHLVSAIRSGE----------------MQRF 196 (455)
T ss_pred EEEECCCCCCHHHH-HHHHHHHHHC-----CCC--EEEEECH-HHH--HHHHHHHHHCCC----------------HHHH
T ss_conf 58878999978999-9999998537-----998--6999749-999--999999997588----------------9999
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECHHHHH---HHHHH--------------HHHHCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9887666666754204688479961647899---99987--------------545303787543337520012467888
Q gi|254780617|r 245 LAPFAGCAMGEYFRDNGYHALIAYDDLQKHA---VAYRQ--------------LSLLLRRPPGREAYPGDVFYLHSRLLE 307 (509)
Q Consensus 245 ~ap~~a~aiAEyfr~~G~~VLi~~Ddltr~A---~a~re--------------isl~~~~pp~~~gyp~~vf~~~s~l~E 307 (509)
T Consensus 197 ---------r~~y--r~~DvL-LIDDIQfl~gK~~tqeEff~tfN~L~~~~KQIVitsDr~P~------el~~l~~RL~S 258 (455)
T PRK12422 197 ---------RSFY--RNVDAL-FIEDIEVFSGKGATQEEFFHTFNSLHTEGKLIVISSSYAPG------DLKAMEERLIS 258 (455)
T ss_pred ---------HHHH--HCCCEE-EEEHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHH------HHHHHHHHHHH
T ss_conf ---------9999--638877-63147887284889999999999999859969996898957------65126899998
Q ss_pred HHHHCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHH
Q ss_conf 87504544588735675310036766443114668854061699615012210266543344412203434389887755
Q gi|254780617|r 308 RAAKMSDALGAGSLTALPVIETQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSRVGSAAQVKAMKQVS 387 (509)
Q Consensus 308 Ra~~~~~~~g~GSiT~~~~v~~~~~D~~~~i~~~~~si~DG~i~l~~~l~~~g~~Paid~~~S~SRv~~~~~~~~~~~~a 387 (509)
T Consensus 259 Rf~-------~GL~v----------~I~~Pd~etr~~Il------~~k~~~~~----~~l~~ev~~~iA~~i~~niReLe 311 (455)
T PRK12422 259 RFE-------WGIAI----------PIHPLTREGLRSFL------MRQAEQLS----IRIEETALDFLIQALSSNVKTLL 311 (455)
T ss_pred HHH-------CCEEE----------CCCCCCHHHHHHHH------HHHHHHCC----CCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 863-------76132----------16899989999999------99998718----88844689999999755179999
Q ss_pred HHHHHHH--HHHHHH-------HHHHHHHC---------CCCH-HHHHHHHH--HHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 6788879--988767-------87987633---------8998-99999999--99999996699988748899999999
Q gi|254780617|r 388 GAVKGEL--AQYREM-------SSFSKFSS---------DLDS-STQKFLSK--GERLTELLKQPQFSPLAMEEQVVMIF 446 (509)
Q Consensus 388 ~~lr~~l--aqy~El-------e~f~~fgs---------dlD~-~t~~~l~r--g~ri~e~LkQ~~~~p~~~~~qv~~l~ 446 (509)
T Consensus 312 Gal~~l~~~~~~~~~~~~~i~~~~~~~~l~d~~~~~~~~~it~~~I~~~Va~~f~i~~~dl~sk~R~k~iv~aRqiAM-Y 390 (455)
T PRK12422 312 HALTLLAKRVAYKKLSHQLLYEDDIKALLHDVLEAAESVRLTPSGIVRAVAQYYGVSPESILGRSQSREYVLPRQVAM-Y 390 (455)
T ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHH-H
T ss_conf 999999999998715688364999999999874224576589999999999872976999607888845557999999-9
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 986698066798999999999999997415999998873
Q gi|254780617|r 447 AGISGCLDEVAVSQVRKFETNFLSHMRVSSQDILEDIRK 485 (509)
Q Consensus 447 a~~~G~ld~i~v~~I~~fe~~l~~~l~~~~~ei~~~I~~ 485 (509)
T Consensus 391 L~R~--lt~~Sl~~IG~~F-------gRdHSTVihaikk 420 (455)
T PRK12422 391 LCRQ--KLSLSYVKIGDVF-------SRDHSTVISSIRA 420 (455)
T ss_pred HHHH--HHCCCHHHHHHHH-------CCCCCHHHHHHHH
T ss_conf 9998--8368899998875-------9985099999999