HHsearch alignment for GI: 254780617 and conserved domain: TIGR02640

>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR013462 The GvpN protein is associated with the production of gas vesicles produced in some prokaryotes to give cells buoyancy , . It belongs to a larger family of ATPases .; GO: 0000166 nucleotide binding, 0005524 ATP binding, 0031412 gas vesicle organization and biogenesis, 0031411 gas vesicle.
Probab=90.10  E-value=0.18  Score=29.77  Aligned_cols=222  Identities=16%  Similarity=0.193  Sum_probs=103.6

Q ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCC---CCCCCEEEEEEECCCC
Q ss_conf             8336552477886115899999998863024667876069999516776789999985114---6742115899728878
Q gi|254780617|r  162 GQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALED---RGALSYSIVVVASASD  238 (509)
Q Consensus       162 GQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~---~~~~~~tvvv~a~a~~  238 (509)
T Consensus        21 G~PvHl~GPaG~GKT~LA~h-vA~~r--------~RPV~l~~G---d~eL~~~DLvG~~~g~~~~kv~DqfihnV~K~~d   88 (265)
T TIGR02640        21 GYPVHLRGPAGTGKTTLAMH-VARKR--------DRPVVLING---DAELTTSDLVGSYAGYTRKKVVDQFIHNVVKLED   88 (265)
T ss_pred             CCCEEEECCCCCCHHHHHHH-HHHHC--------CCCEEEEEC---CCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCC
T ss_conf             88667447888556899999-99736--------896899865---8232654423154675222232012111342512


Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf             88999998876666667542046884799616478999998754530378754333752001246788887504544588
Q gi|254780617|r  239 PAPMQLLAPFAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGA  318 (509)
Q Consensus       239 ~~~~r~~ap~~a~aiAEyfr~~G~~VLi~~Ddltr~A~a~reisl~~~~pp~~~gyp~~vf~~~s~l~ERa~~~~~~~g~  318 (509)
T Consensus        89 ~~~~~W~D~rLt~Av~eG~-------TLVYdEF~Rs------------kP~~nN-------VLLSvlEE~vL~LPg~---  139 (265)
T TIGR02640        89 IVRQNWVDNRLTLAVREGF-------TLVYDEFTRS------------KPETNN-------VLLSVLEEGVLELPGK---  139 (265)
T ss_pred             CCCCCCCCCHHHHHHHCCC-------EEEECCCCCC------------CCHHHH-------HHHHHHHHHHHCCCCC---
T ss_conf             2002667835789975697-------2766475788------------620456-------5675555232158887---


Q ss_pred             CCEEEEEEEECCCCCCCCCHHHH--HHHHHCCEEEEECCHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             73567531003676644311466--8854061699615012210266543344412203434389887755678887998
Q gi|254780617|r  319 GSLTALPVIETQVNDVSAYIPTN--VISITDGQIFLETELFYQGIRPAINIGLSVSRVGSAAQVKAMKQVSGAVKGELAQ  396 (509)
Q Consensus       319 GSiT~~~~v~~~~~D~~~~i~~~--~~si~DG~i~l~~~l~~~g~~Paid~~~S~SRv~~~~~~~~~~~~a~~lr~~laq  396 (509)
T Consensus       140 -~~~------------~~Yv~VhP~FR-----~IfTSNp~EYAGVh------------------~~QDALlDRL~ti~~D  183 (265)
T TIGR02640       140 -RGE------------SRYVDVHPEFR-----VIFTSNPVEYAGVH------------------ETQDALLDRLVTISMD  183 (265)
T ss_pred             -CCC------------CCCEEECCCCC-----EEECCCCCCCCCCC------------------CHHHHHHHHHCCCCCC
T ss_conf             -877------------87225788702-----46314870105767------------------7166776644004578


Q ss_pred             HHHHHHHHHHH---CCC-CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHHCCCCCCCCHHH
Q ss_conf             87678798763---389-9899999999999999966999887488999-9999998669806679899
Q gi|254780617|r  397 YREMSSFSKFS---SDL-DSSTQKFLSKGERLTELLKQPQFSPLAMEEQ-VVMIFAGISGCLDEVAVSQ  460 (509)
Q Consensus       397 y~Ele~f~~fg---sdl-D~~t~~~l~rg~ri~e~LkQ~~~~p~~~~~q-v~~l~a~~~G~ld~i~v~~  460 (509)
T Consensus       184 ~~D~~~e~ai~~~~t~~~~~~a~~IV~lv~~~R~a~g~e~~~Gl~~RA~lMiA~~at~~dipv~~d~~~  252 (265)
T TIGR02640       184 YPDEDTETAILRAKTDVAEESAATIVRLVRELRLASGDEKTSGLSLRASLMIAEVATQEDIPVDVDDED  252 (265)
T ss_pred             CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH
T ss_conf             544478999999860612467899999999984212553337436899999998754437986776025