>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.

Probab=91.44  E-value=0.13  Score=30.87  Aligned_cols=22  Identities=9%  Similarity=0.303  Sum_probs=14.0

Q ss_pred             HCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             3279898999999999999985
Q gi|254780617|r  485 KQKVLTDDIRSKLINEIKVFLE  506 (509)
Q Consensus       485 ~~~~l~de~~~~L~~~i~~~~~  506 (509)
T Consensus       628 ~ts~LD~~~e~~i~~~l~~~~~  649 (694)
T TIGR03375       628 PTSAMDNRSEERFKDRLKRWLA  649 (694)
T ss_pred             CCCCCCHHHHHHHHHHHHHHCC
T ss_conf             7568899999999999998669