HHsearch alignment for GI: 254780617 and conserved domain: TIGR03415
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=90.49 E-value=0.17 Score=29.90 Aligned_cols=36 Identities=22% Similarity=0.462 Sum_probs=29.5
Q ss_pred HCC--HHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHH
Q ss_conf 416--0233101111568336552477886115899999
Q gi|254780617|r 147 STG--IKAIDSLIPIGRGQRELIIGDRKTGKTSIILDTF 183 (509)
Q Consensus 147 ~TG--I~~ID~l~pigrGQR~~I~g~~g~GKt~l~~~~I 183 (509)
T Consensus 33 ~tg~~vAV~dvsl~I~~GEi~~lvGpSGsGKSTLL-r~i 70 (382)
T TIGR03415 33 ETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLL-RAV 70 (382)
T ss_pred HHCCEEEEECCEEEECCCCEEEEECCCCCHHHHHH-HHH
T ss_conf 33999989651748879989999999973499999-999