HHsearch alignment for GI: 254780617 and conserved domain: TIGR03598
>TIGR03598 GTPase_YsxC ribosome biogenesis GTP-binding protein YsxC/EngB. Members of this protein family are a GTPase associated with ribosome biogenesis, typified by YsxC from Bacillus subutilis. The family is widely but not universally distributed among bacteria. Members commonly are called EngB based on homology to EngA, one of several other GTPases of ribosome biogenesis. Cutoffs as set find essentially all bacterial members, but also identify large numbers of eukaryotic (probably organellar) sequences. This protein is found in about 80 percent of bacterial genomes.
Probab=91.30 E-value=1.1 Score=23.91 Aligned_cols=30 Identities=27% Similarity=0.542 Sum_probs=24.0
Q ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 1115683365524778861158999999988
Q gi|254780617|r 157 IPIGRGQRELIIGDRKTGKTSIILDTFLNQK 187 (509)
Q Consensus 157 ~pigrGQR~~I~g~~g~GKt~l~~~~I~nq~ 187 (509)
T Consensus 13 ~p~~~~p~IaivGrpNvGKSTL-~N~L~g~k 42 (179)
T TIGR03598 13 LPPDDGPEIAFAGRSNVGKSSL-INALTNRK 42 (179)
T ss_pred CCCCCCCEEEEECCCCCCHHHH-HHHHHCCC
T ss_conf 9998897899986999888999-99986898