HHsearch alignment for GI: 254780617 and conserved domain: cd01122

>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.

Probab=91.79  E-value=0.72  Score=25.37  Aligned_cols=65  Identities=17%  Similarity=0.246  Sum_probs=42.5

Q ss_pred             HHHHCCHHHHHCCCC-CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHH
Q ss_conf             144416023310111-156833655247788611589999999886302466787606999951677678999
Q gi|254780617|r  144 EPLSTGIKAIDSLIP-IGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVAR  215 (509)
Q Consensus       144 ~~l~TGI~~ID~l~p-igrGQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~  215 (509)
T Consensus        11 ~~~~~pf~~LD~~~~Gl~~GeL~viaarpg~GKT~f~~~~a~~~~~~~g-------~~vl~~SlEm~~~~~~~   76 (271)
T cd01122          11 EEVWWPFPVLNKLTKGLRKGELIILTAGTGVGKTTFLREYALDLITQHG-------VRVGTISLEEPVVRTAR   76 (271)
T ss_pred             CCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC-------CEEEEEECCCCHHHHHH
T ss_conf             5665881668887379999808999968998699999999999999769-------90899970499999999