>cd01133 F1-ATPase_beta F1 ATP synthase beta subunit, nucleotide-binding domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The beta subunit of ATP synthase is catalytic.

Probab=100.00 E-value=0 Score=693.91 Aligned_cols=272 Identities=28% Similarity=0.465 Sum_probs=261.7 Q ss_pred EEEEECCHHHHHCCCCHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCEEEEECCCCC Q ss_conf 78866794698300030023144664445444100101357731126600144416023310111156833655247788 Q gi|254780617|r 94 IVDVPVGLELLGRVVDALGNPIDGKGPIKCEQRSCTEADAPGIIQRQSVCEPLSTGIKAIDSLIPIGRGQRELIIGDRKT 173 (509) Q Consensus 94 ~~~vpvG~~lLGRVvD~lG~PlDg~g~i~~~~~~~i~~~~p~~~~R~~i~~~l~TGI~~ID~l~pigrGQR~~I~g~~g~ 173 (509) T Consensus 1 Pl~ipVg~~lLGRVvd~~G~PiDg~~~i~~~~~~pi~~~~p~~~~R~~~~e~l~TGIr~ID~l~pigkGQR~~I~~~~g~ 80 (274) T cd01133 1 PISVPVGPETLGRIFNVLGEPIDERGPIKTKKTWPIHREAPEFVEQSTKTEILETGIKVIDLLAPYAKGGKIGLFGGAGV 80 (274) T ss_pred CCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCC T ss_conf 96577680421656368965248999999986042568996845607878731158666644466147857787579999 Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH Q ss_conf 61158999999988630246678760699995167767899999851146742115899728878889999988766666 Q gi|254780617|r 174 GKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGALSYSIVVVASASDPAPMQLLAPFAGCAM 253 (509) Q Consensus 174 GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~~~~~~~tvvv~a~a~~~~~~r~~ap~~a~ai 253 (509) T Consensus 81 GKt~ll~~ii~~~~~~-------~~~v~V~~~IGer~~ev~~~~~~~~~~~~l~~tvvv~~tad~~~~~r~~~~~~a~ai 153 (274) T cd01133 81 GKTVLIMELINNIAKA-------HGGYSVFAGVGERTREGNDLYHEMKESGVLSKTALVYGQMNEPPGARARVALTGLTM 153 (274) T ss_pred CCCHHHHHHHHHHHHC-------CCCEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH T ss_conf 8236899999999850-------898799998425548899999972035665337999834555405789999999999 Q ss_pred HHHHHC-CCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC Q ss_conf 675420-4688479961647899999875453037875433375200124678888750454458873567531003676 Q gi|254780617|r 254 GEYFRD-NGYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGSLTALPVIETQVN 332 (509) Q Consensus 254 AEyfr~-~G~~VLi~~Ddltr~A~a~reisl~~~~pp~~~gyp~~vf~~~s~l~ERa~~~~~~~g~GSiT~~~~v~~~~~ 332 (509) T Consensus 154 AE~frd~~G~dVLll~DslTr~A~A~reis~~~g~~P~~~gyp~~l~~~~~~l~ER~~~~----~~GSiT~i~tv~~~~d 229 (274) T cd01133 154 AEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITST----KKGSITSVQAVYVPAD 229 (274) T ss_pred HHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC----CCCCEEEEEEEECCCC T ss_conf 999997289859999718689999999888862899986666830788999999974488----8987468889974588 Q ss_pred CCCCCHHHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCHHHCCC Q ss_conf 64431146688540616996150122102665433444122034 Q gi|254780617|r 333 DVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSRVGS 376 (509) Q Consensus 333 D~~~~i~~~~~si~DG~i~l~~~l~~~g~~Paid~~~S~SRv~~ 376 (509) T Consensus 230 D~~dpi~~~~~~i~dG~ivLsr~la~~g~yPAIdv~~S~SR~m~ 273 (274) T cd01133 230 DLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRILD 273 (274) T ss_pred CCCCCHHHHHHHHHCEEEEECHHHHHCCCCCCCCCCCCCCCCCC T ss_conf 87661778887740729998588996799996377653101258

HHsearch alignment for GI: 254780617 and conserved domain: cd01133