>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=90.90  E-value=0.14  Score=30.62  Aligned_cols=32  Identities=25%  Similarity=0.311  Sum_probs=24.6

Q ss_pred             HHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHH
Q ss_conf             331011115683365524778861158999999
Q gi|254780617|r  152 AIDSLIPIGRGQRELIIGDRKTGKTSIILDTFL  184 (509)
Q Consensus       152 ~ID~l~pigrGQR~~I~g~~g~GKt~l~~~~I~  184 (509)
T Consensus        15 ~l~~~~~v~~GEiv~ilGpNGaGKSTll-k~i~   46 (177)
T cd03222          15 LLVELGVVKEGEVIGIVGPNGTGKTTAV-KILA   46 (177)
T ss_pred             EECCCCCCCCCCEEEEECCCCCCHHHHH-HHHH
T ss_conf             8658995589989999899999999999-9996