HHsearch alignment for GI: 254780617 and conserved domain: cd03225
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=90.37 E-value=0.19 Score=29.62 Aligned_cols=30 Identities=27% Similarity=0.512 Sum_probs=24.9
Q ss_pred HCCCCCCCCCEEEEECCCCCCCHHHHHHHHH
Q ss_conf 1011115683365524778861158999999
Q gi|254780617|r 154 DSLIPIGRGQRELIIGDRKTGKTSIILDTFL 184 (509)
Q Consensus 154 D~l~pigrGQR~~I~g~~g~GKt~l~~~~I~ 184 (509)
T Consensus 19 ~vsl~i~~Gei~~iiG~nGaGKSTLl-k~i~ 48 (211)
T cd03225 19 DISLTIKKGEFVLIVGPNGSGKSTLL-RLLN 48 (211)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHH-HHHH
T ss_conf 31788849979999889999899999-9996