HHsearch alignment for GI: 254780617 and conserved domain: cd03255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=91.18 E-value=0.14 Score=30.65 Aligned_cols=29 Identities=21% Similarity=0.439 Sum_probs=24.2
Q ss_pred HCCCCCCCCCEEEEECCCCCCCHHHHHHHH
Q ss_conf 101111568336552477886115899999
Q gi|254780617|r 154 DSLIPIGRGQRELIIGDRKTGKTSIILDTF 183 (509)
Q Consensus 154 D~l~pigrGQR~~I~g~~g~GKt~l~~~~I 183 (509)
T Consensus 22 ~isl~i~~Ge~~~iiG~sGsGKTTll~-~i 50 (218)
T cd03255 22 GVSLSIEKGEFVAIVGPSGSGKSTLLN-IL 50 (218)
T ss_pred CEEEEECCCCEEEEECCCCCHHHHHHH-HH
T ss_conf 628998699899999999986999999-99