HHsearch alignment for GI: 254780617 and conserved domain: pfam09378
>pfam09378 HAS-barrel HAS barrel domain. The HAS barrel is named after HerA-ATP Synthase. In ATP synthases, this domain is implicated in the assembly of the catalytic toroid and docking of accessory subunits, such as the subunit of the ATP synthase complex. Similar roles in docking of the functional partner, the NurA nuclease, and assembly of the HerA toroid complex appear likely for the HAS-barrel of the HerA family.
Probab=90.66 E-value=1.2 Score=23.80 Aligned_cols=43 Identities=49% Similarity=0.706 Sum_probs=36.1
Q ss_pred EEEEEEEEECCEEEEECCCCCCCCCEEEEC---CCEEEEEEEECCCE
Q ss_conf 035899982758999758887737479957---98189999205985
Q gi|254780617|r 27 EIGRVLSIGDGIARVYGLNNIRAGEMVQFS---HGVYGMALNLEVDN 70 (509)
Q Consensus 27 ~~G~V~~V~~giv~v~GL~~a~~GElv~~~---~g~~G~Vi~l~~d~ 70 (509)
T Consensus 4 vig~~~~-~~~~~~~~~~~~v~~Ge~V~i~~~~~~vlG~V~~i~~~~ 49 (88)
T pfam09378 4 VIGTVSS-NDGIFRVEGLKDVRVGEYVEIELDGSKVLGMVLNIERGL 49 (88)
T ss_pred EEEEEEC-CCCEEEEECCCCCCCCCEEEEEECCEEEEEEEEEEECCC
T ss_conf 9988744-885799605663103328999977868998888650204