RPSBLAST alignment for GI: 254780617 and conserved domain: TIGR03305

>gnl|CDD|132348 TIGR03305, alt_F1F0_F1_bet, alternate F1F0 ATPase, F1 subunit beta. A small number of taxonomically diverse prokaryotic species have what appears to be a second ATP synthase, in addition to the normal F1F0 ATPase in bacteria and A1A0 ATPase in archaea. These enzymes use ion gradients to synthesize ATP, and in principle may run in either direction. This model represents the F1 beta subunit of this apparent second ATP synthase. Length = 449

 Score =  117 bits (295), Expect = 6e-27
 Identities = 103/407 (25%), Positives = 179/407 (43%), Gaps = 24/407 (5%)

Query: 56  SHGVYGMALNLEVDNVGVVILGSYKEISEGDIVKRTGRIVDVPVGLELLGRVVDALGNPI 115
              V  +   L+  +V  + L   + ++ G  V+ +G  +  PVG   L R+ D  GN I
Sbjct: 32  GEVVVEVLSQLDAHHVRGIALTPTQGLARGMPVRDSGGPLKAPVGKPTLSRMFDVFGNTI 91

Query: 116 DGKGPIK-CEQRSCTEADAPGIIQRQSVCEPLSTGIKAIDSLIPIGRGQRELIIGDRKTG 174
           D + P K  E RS  +A  P + +R S  E   TGIKAID L+P+ RG +  + G    G
Sbjct: 92  DRREPPKDVEWRSVHQA-PPTLTRRSSKSEVFETGIKAIDVLVPLERGGKAGLFGGAGVG 150

Query: 175 KTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGALSYSIVVVA 234
           KT ++ +   N    H   S       I+  IG++        + +++ G L  +++V  
Sbjct: 151 KTVLLTEMIHNMVGQHQGVS-------IFCGIGERCREGEELYREMKEAGVLDNTVMVFG 203

Query: 235 SASDPAPMQLLAPFAGCAMGEYFRDN-GYHALIAYDDLQKHAVAYRQLSLLLRRPPGREA 293
             ++P   +         M EYFRD+     L+  D++ +   A  ++S LL + P R  
Sbjct: 204 QMNEPPGARFRVGHTALTMAEYFRDDEKQDVLLLIDNIFRFIQAGSEVSGLLGQMPSRLG 263

Query: 294 YPGDVFYLHSRLLERAAKMSDALGAGSLTALPVIETQVNDVSAYIPTNVISITDGQIFLE 353
           Y   +    + L ER A  SD    G++T++  +    +D +     +  S     + L 
Sbjct: 264 YQPTLGTELAELEERIATTSD----GAITSIQAVYVPADDFTDPAAVHTFSHLSASLVLS 319

Query: 354 TELFYQGIRPAINIGLSVSRVGSAAQV-KAMKQVSGAVKGELAQYREMSSFSKF--SSDL 410
            +   +G+ PAI+   S S++ +   V +    ++  V+  LAQY E+           L
Sbjct: 320 RKRASEGLYPAIDPLQSTSKMATPGIVGERHYDLAREVRQTLAQYEELKDIIAMLGLEQL 379

Query: 411 DSSTQKFLSKGERLTELLKQP-----QFSPLAMEEQVVMIFAGISGC 452
               ++ +++  RL   L QP     QF+   M+ + V +   + GC
Sbjct: 380 SREDRRVVNRARRLERFLTQPFFTTEQFT--GMKGKTVSLEDALDGC 424