RPSBLAST alignment for GI: 254780617 and conserved domain: TIGR01040
>gnl|CDD|162169 TIGR01040, V-ATPase_V1_B, V-type (H+)-ATPase V1, B subunit. This models eukaryotic vacuolar (H+)-ATPase that is responsible for acidifying cellular compartments. This enzyme shares extensive sequence similarity with archaeal ATP synthase. Length = 466
Score = 105 bits (263), Expect = 4e-23
Identities = 83/301 (27%), Positives = 134/301 (44%), Gaps = 12/301 (3%)
Query: 91 TGRIVDVPVGLELLGRVVDALGNPIDGKGPIKCEQRSCTEADAPGIIQRQSVCEPLSTGI 150
TG I+ PV ++LGRV + G PID P+ E R E + TGI
Sbjct: 70 TGDILRTPVSEDMLGRVFNGSGKPIDKGPPVLAEDYLDINGQPINPYARIYPEEMIQTGI 129
Query: 151 KAIDSLIPIGRGQRELIIGDRKTG------KTSIILDTFLNQKSSHDKGSEKDKVYCIYV 204
AID + I RGQ+ I G I L + + D + + I
Sbjct: 130 SAIDVMNSIARGQKIPIFS--AAGLPHNEIAAQICRQAGLVKLPTKDVHDGHEDNFAIVF 187
Query: 205 AIGQKRSSVARFVKA-LEDRGALSYSIVVVASASDPAPMQLLAPFAGCAMGEYFR-DNGY 262
A ARF K E+ G++ + + A+DP +++ P EY
Sbjct: 188 AAMGVNMETARFFKQDFEENGSMERVCLFLNLANDPTIERIITPRLALTTAEYLAYQCEK 247
Query: 263 HALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGSLT 322
H L+ D+ +A A R++S PGR +PG ++ + + ERA ++ GS+T
Sbjct: 248 HVLVILTDMSSYADALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR--NGSIT 305
Query: 323 ALPVIETQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSRVGSAAQVKA 382
+P++ +D++ IP IT+GQI+++ +L + I P IN+ S+SR+ +A +
Sbjct: 306 QIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEG 365
Query: 383 M 383
M
Sbjct: 366 M 366