RPSBLAST alignment for GI: 254780617 and conserved domain: PRK06936
>gnl|CDD|180762 PRK06936, PRK06936, type III secretion system ATPase; Provisional. Length = 439
Score = 173 bits (439), Expect = 1e-43
Identities = 131/448 (29%), Positives = 202/448 (45%), Gaps = 36/448 (8%)
Query: 8 ISDILRKRIKDFGNDSEFSEI-GRVLSIGDGIARVYGLNNIRAGEMVQFSHGVYGMALNL 66
I LR I S +I GRV + I + + +R GE+ + ++L
Sbjct: 7 IPHHLRHAI----VGSRLIQIRGRVTQVTGTILKAV-VPGVRIGELCYLRNPDNSLSLQA 61
Query: 67 EVDNVGVV-------ILGSYKEISEGDIVKRTGRIVDVPVGLELLGRVVDALGNPIDGKG 119
EV +G LG IS V TG + V VG LLGRV+D LG P DG
Sbjct: 62 EV--IGFAQHQALLTPLGEMYGISSNTEVSPTGTMHQVGVGEHLLGRVLDGLGQPFDGGH 119
Query: 120 PIKCEQRSCTEADAPGIIQRQSVCEPLSTGIKAIDSLIPIGRGQRELIIGDRKTGKTSII 179
P + ADAP + R+ + PLS G++ ID L+ G GQR I GK++++
Sbjct: 120 PPEPAAWYPVYADAPAPMSRRLIETPLSLGVRVIDGLLTCGEGQRMGIFAAAGGGKSTLL 179
Query: 180 LDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGA--LSYSIVVVASAS 237
+S + +E D + IG++ V F+++ D G L +++VVA++
Sbjct: 180 --------ASLIRSAEVD--VTVLALIGERGREVREFIES--DLGEEGLRKAVLVVATSD 227
Query: 238 DPAPMQLLAPFAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGD 297
P+ + A F ++ EYFRD G L+ D + + A A R++ L PP R YP
Sbjct: 228 RPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPS 287
Query: 298 VFYLHSRLLERAAKMSDALGAGSLTALPVIETQVNDVSAYIPTNVISITDGQIFLETELF 357
VF RL+ERA SD GS+TAL + + +D++ + SI DG I L +L
Sbjct: 288 VFAALPRLMERAG-QSD---KGSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLA 343
Query: 358 YQGIRPAINIGLSVSRVGSAAQVKAMKQVSGAVKGELAQYREMSSFSK---FSSDLDSST 414
PAI++ S SRV + K K +G ++ LA+Y E+ + + D
Sbjct: 344 AANHYPAIDVLRSASRVMNQIVSKEHKTWAGRLRELLAKYEEVELLLQIGEYQKGQDKEA 403
Query: 415 QKFLSKGERLTELLKQPQFSPLAMEEQV 442
+ + + + L+Q E +
Sbjct: 404 DQAIERIGAIRGFLRQGTHELSHFNETL 431