RPSBLAST alignment for GI: 254780617 and conserved domain: cd01135
>gnl|CDD|30001 cd01135, V_A-ATPase_B, V/A-type ATP synthase (non-catalytic) subunit B. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria. This subfamily consists of the non-catalytic beta subunit.. Length = 276
Score = 139 bits (351), Expect = 2e-33
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 7/281 (2%)
Query: 94 IVDVPVGLELLGRVVDALGNPIDGKGPIKCEQRSCTEADAPGIIQRQSVCEPLSTGIKAI 153
+ VPV ++LGR+ + G PIDG I E+ + R E + TGI AI
Sbjct: 1 TLKVPVSEDMLGRIFNGSGKPIDGGPEILAEEYLDINGPPINPVARIYPEEMIQTGISAI 60
Query: 154 DSLIPIGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSV 213
D + + RGQ+ I +G L + +++ E V ++ A+G
Sbjct: 61 DGMNTLVRGQKIPIFSG--SGLPHNELAAQIARQAGVVGEEENFAV--VFAAMGITMEDA 116
Query: 214 ARFVKALEDRGALSYSIVVVASASDPAPMQLLAPFAGCAMGEYFR-DNGYHALIAYDDLQ 272
F E+ GAL ++ + A+DP +++ P EY + G H L+ D+
Sbjct: 117 RFFKDDFEETGALERVVLFLNLANDPTIERIITPRMALTTAEYLAYEKGKHVLVILTDMT 176
Query: 273 KHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGSLTALPVIETQVN 332
+A A R++S PGR YPG ++ + + ERA ++ GS+T +P++ +
Sbjct: 177 NYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVEGR--NGSITQIPILTMPND 234
Query: 333 DVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSR 373
D++ IP IT+GQI L+ +L +GI P IN+ S+SR
Sbjct: 235 DITHPIPDLTGYITEGQIVLDRQLHNRGIYPPINVLPSLSR 275