HHsearch alignment for GI: 254780618 and conserved domain: COG0712
>COG0712 AtpH F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) [Energy production and conversion].
Probab=100.00 E-value=8.6e-39 Score=276.64 Aligned_cols=176 Identities=34% Similarity=0.498 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 44455579999999999863998999999999999950699899985184522045657889986204664346899999
Q gi|254780618|r 7 LFSDVPGRYSHSLFGVSNEEGVLDIVSDDISRLEALLMESADLRFFIHNPLFSMKDRRSVIDDLVKDAHFCAITANFLRI 86 (186)
Q Consensus 7 ~~~~ia~~YA~AL~~~a~e~~~l~~v~~~l~~i~~~~~~~~~l~~~l~sp~i~~~~K~~ii~~i~~~~~~~~~~~~fl~~ 86 (186)
T Consensus 3 ~~~~va~~YA~ALf~~A~e~~~~~~~~~~L~~~~~i~~~~~~l~~ll~sp~~~~~~k~~li~~i~~~~-~~~~~~nfL~l 81 (178)
T COG0712 3 ELSTVARRYAKALFELAEEKGQLEEVEEELTFLAEILKNSPKLKQLLSSPAVSAEDKKELLISIFKKI-GDPLLQNFLRL 81 (178)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCC-CCHHHHHHHHH
T ss_conf 26788899999999999987419999999999999982677699986485679899999999998433-85899999999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCHHCEEEEEECCEE
Q ss_conf 85332011014249999999888765553310105689989999999999997489589999997414023899979978
Q gi|254780618|r 87 LVANGRLSVLPAIIKSFRAVCMYYRNEVMAFVRAFSGLSLLQQNKLGECLEKIVGKTVILDVMEDSALMGGFIVEIGAHQ 166 (186)
Q Consensus 87 L~~~~r~~~l~~I~~~f~~~~~~~~~~~~~~V~sa~~ls~~~~~~i~~~l~~~~~~~i~l~~~vD~slIGG~~i~vg~~~ 166 (186)
T Consensus 82 l~en~Rl~~l~~i~~~~~~l~~~~~~~~~a~V~SA~~Ls~~q~~~l~~~l~k~~~~~v~i~~~VD~sliGG~iI~vgd~v 161 (178)
T COG0712 82 LAENKRLNLLPEILEEFLKLAAESRGIVEAEVTSAFELSDEQLTKLEAKLEKKFGKKVKLNNKIDPSLIGGLIIKVGDEV 161 (178)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCEEEEECCEE
T ss_conf 99754164699999999999999629068999866889999999999999999589723786677788185699989999
Q ss_pred EEHHHHHHHHHHHHHHH
Q ss_conf 50279999999999852
Q gi|254780618|r 167 IDASLRTQLLKLGCILK 183 (186)
Q Consensus 167 iD~Si~~kL~~l~~~l~ 183 (186)
T Consensus 162 iD~Svr~~L~~l~~~l~ 178 (178)
T COG0712 162 IDGSVRGKLKRLAKALK 178 (178)
T ss_pred EECCHHHHHHHHHHHCC
T ss_conf 70319999999998519