HHsearch alignment for GI: 254780618 and conserved domain: PRK06328
>PRK06328 type III secretion system protein; Validated.
Probab=93.37 E-value=0.74 Score=26.21 Aligned_cols=76 Identities=21% Similarity=0.163 Sum_probs=57.4
Q ss_pred HHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCHH-CEEEEEECCEEEEHHHHHHHHHHHHHHHH
Q ss_conf 887655533101056899899999999999974895899999974140-23899979978502799999999998522
Q gi|254780618|r 108 MYYRNEVMAFVRAFSGLSLLQQNKLGECLEKIVGKTVILDVMEDSALM-GGFIVEIGAHQIDASLRTQLLKLGCILKE 184 (186)
Q Consensus 108 ~~~~~~~~~~V~sa~~ls~~~~~~i~~~l~~~~~~~i~l~~~vD~slI-GG~~i~vg~~~iD~Si~~kL~~l~~~l~~ 184 (186)
T Consensus 126 ~~vr~~~~V~IrV~-P~d~~~V~~~~~~L~~~~~~~~~L~i~~D~~l~~GgCiIETe~G~VDAsldtQL~aL~~Al~~ 202 (223)
T PRK06328 126 KELTQNKHIIIHVN-PKDLAIVEQNRPELKKIVEYADSLILSPKADVTPGGCIIETEAGIVNAQLDVQLAALEKAFST 202 (223)
T ss_pred HHHHHCCEEEEEEC-HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCEEECCHHHHHHHHHHHHHH
T ss_conf 99861881799988-876999999899999746777762673089879998699558856961289999999999999