HHsearch alignment for GI: 254780618 and conserved domain: PRK06328

>PRK06328 type III secretion system protein; Validated.
Probab=93.37  E-value=0.74  Score=26.21  Aligned_cols=76  Identities=21%  Similarity=0.163  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCHH-CEEEEEECCEEEEHHHHHHHHHHHHHHHH
Q ss_conf             887655533101056899899999999999974895899999974140-23899979978502799999999998522
Q gi|254780618|r  108 MYYRNEVMAFVRAFSGLSLLQQNKLGECLEKIVGKTVILDVMEDSALM-GGFIVEIGAHQIDASLRTQLLKLGCILKE  184 (186)
Q Consensus       108 ~~~~~~~~~~V~sa~~ls~~~~~~i~~~l~~~~~~~i~l~~~vD~slI-GG~~i~vg~~~iD~Si~~kL~~l~~~l~~  184 (186)
T Consensus       126 ~~vr~~~~V~IrV~-P~d~~~V~~~~~~L~~~~~~~~~L~i~~D~~l~~GgCiIETe~G~VDAsldtQL~aL~~Al~~  202 (223)
T PRK06328        126 KELTQNKHIIIHVN-PKDLAIVEQNRPELKKIVEYADSLILSPKADVTPGGCIIETEAGIVNAQLDVQLAALEKAFST  202 (223)
T ss_pred             HHHHHCCEEEEEEC-HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCEEECCHHHHHHHHHHHHHH
T ss_conf             99861881799988-876999999899999746777762673089879998699558856961289999999999999