HHsearch alignment for GI: 254780618 and conserved domain: PRK13436
>PRK13436 F0F1 ATP synthase subunit delta; Provisional.
Probab=100.00 E-value=6.5e-41 Score=290.65 Aligned_cols=175 Identities=19% Similarity=0.256 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 45557999999999986399899999999999995069989998518452204565788998620466434689999985
Q gi|254780618|r 9 SDVPGRYSHSLFGVSNEEGVLDIVSDDISRLEALLMESADLRFFIHNPLFSMKDRRSVIDDLVKDAHFCAITANFLRILV 88 (186)
Q Consensus 9 ~~ia~~YA~AL~~~a~e~~~l~~v~~~l~~i~~~~~~~~~l~~~l~sp~i~~~~K~~ii~~i~~~~~~~~~~~~fl~~L~ 88 (186)
T Consensus 5 ~~~~~~YA~ALf~~A~e~~~l~~v~~~l~~i~~~~~~~~~l~~~l~~p~i~~~~K~~il~~~~~-~~~~~~~~nfl~lL~ 83 (179)
T PRK13436 5 DKNIYNYAEALFDIAVKENKVEKYINDVFKLIEILKNNQDLVKLLSSHFIDKQKKFKIIDKIFS-ANIDIILINFLKIIA 83 (179)
T ss_pred CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHH-CCCCHHHHHHHHHHH
T ss_conf 3407699999999998739999999999999999947999999870999999999999999984-248899999999998
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCHHCEEEEEECCEEEE
Q ss_conf 33201101424999999988876555331010568998999999999999748958999999741402389997997850
Q gi|254780618|r 89 ANGRLSVLPAIIKSFRAVCMYYRNEVMAFVRAFSGLSLLQQNKLGECLEKIVGKTVILDVMEDSALMGGFIVEIGAHQID 168 (186)
Q Consensus 89 ~~~r~~~l~~I~~~f~~~~~~~~~~~~~~V~sa~~ls~~~~~~i~~~l~~~~~~~i~l~~~vD~slIGG~~i~vg~~~iD 168 (186)
T Consensus 84 ~~~R~~~l~~I~~~f~~l~~~~~~~~~a~V~sA~~Ls~~q~~~i~~~l~k~~~k~v~l~~~vDpslIGG~ii~vgd~viD 163 (179)
T PRK13436 84 KNNLFINYKQILKKLIKKANSKLNITYGEIYSTEKLSEVQISEFESKISKKLNKKVELVNKIDPKLIAGIRIIVDNKVFE 163 (179)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHCCCEEEEECCEEEE
T ss_conf 77737579999999999999978947999988899999999999999999979965999766711308369999999875
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 2799999999998522
Q gi|254780618|r 169 ASLRTQLLKLGCILKE 184 (186)
Q Consensus 169 ~Si~~kL~~l~~~l~~ 184 (186)
T Consensus 164 ~Sik~kL~~lk~~L~~ 179 (179)
T PRK13436 164 NSIKSKLKELKKQVLK 179 (179)
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 8799999999998619