HHsearch alignment for GI: 254780618 and conserved domain: pfam00213
>pfam00213 OSCP ATP synthase delta (OSCP) subunit. The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.
Probab=100.00 E-value=2e-40 Score=287.45 Aligned_cols=171 Identities=37% Similarity=0.594 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 55799999999998639989999999999999506998999851845220456578899862046643468999998533
Q gi|254780618|r 11 VPGRYSHSLFGVSNEEGVLDIVSDDISRLEALLMESADLRFFIHNPLFSMKDRRSVIDDLVKDAHFCAITANFLRILVAN 90 (186)
Q Consensus 11 ia~~YA~AL~~~a~e~~~l~~v~~~l~~i~~~~~~~~~l~~~l~sp~i~~~~K~~ii~~i~~~~~~~~~~~~fl~~L~~~ 90 (186)
T Consensus 1 ia~rYA~ALf~~a~e~~~l~~v~~~l~~~~~~~~~~~~l~~~l~sp~i~~~~K~~~i~~~~~~-~~~~~~~nfl~~l~~~ 79 (171)
T pfam00213 1 IARRYAKALFELAKEKGSLDEVEEDLEALKAVLAENPDLREFLSNPLISAEEKKALLKAVFGG-KLSELTKNFLKLLAEN 79 (171)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHC
T ss_conf 964789999999987499999999999999999649899998659887999999999998510-0679999999999874
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCHHCEEEEEECCEEEEHH
Q ss_conf 20110142499999998887655533101056899899999999999974895899999974140238999799785027
Q gi|254780618|r 91 GRLSVLPAIIKSFRAVCMYYRNEVMAFVRAFSGLSLLQQNKLGECLEKIVGKTVILDVMEDSALMGGFIVEIGAHQIDAS 170 (186)
Q Consensus 91 ~r~~~l~~I~~~f~~~~~~~~~~~~~~V~sa~~ls~~~~~~i~~~l~~~~~~~i~l~~~vD~slIGG~~i~vg~~~iD~S 170 (186)
T Consensus 80 ~R~~~l~~I~~~f~~l~~~~~~~~~~~V~sA~~Ls~~q~~~i~~~L~~~~~~~v~l~~~vD~slIGG~~i~igd~viD~S 159 (171)
T pfam00213 80 GRLSLLPEIAEEFEELYNEHRGIVEATVTSAVPLSEEQLKALKAALEKKTGKKVKLETKVDPSLIGGVVVRVGDKVIDGS 159 (171)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCEEEEEECCEEEEHH
T ss_conf 55111899999999999997597589999727999999999999999885556541666870140727999999987587
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999985
Q gi|254780618|r 171 LRTQLLKLGCIL 182 (186)
Q Consensus 171 i~~kL~~l~~~l 182 (186)
T Consensus 160 i~~~L~~l~~~L 171 (171)
T pfam00213 160 VRGKLERLKRAL 171 (171)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999629