HHsearch alignment for GI: 254780618 and conserved domain: pfam00213

>pfam00213 OSCP ATP synthase delta (OSCP) subunit. The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.
Probab=100.00  E-value=2e-40  Score=287.45  Aligned_cols=171  Identities=37%  Similarity=0.594  Sum_probs=167.7

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             55799999999998639989999999999999506998999851845220456578899862046643468999998533
Q gi|254780618|r   11 VPGRYSHSLFGVSNEEGVLDIVSDDISRLEALLMESADLRFFIHNPLFSMKDRRSVIDDLVKDAHFCAITANFLRILVAN   90 (186)
Q Consensus        11 ia~~YA~AL~~~a~e~~~l~~v~~~l~~i~~~~~~~~~l~~~l~sp~i~~~~K~~ii~~i~~~~~~~~~~~~fl~~L~~~   90 (186)
T Consensus         1 ia~rYA~ALf~~a~e~~~l~~v~~~l~~~~~~~~~~~~l~~~l~sp~i~~~~K~~~i~~~~~~-~~~~~~~nfl~~l~~~   79 (171)
T pfam00213         1 IARRYAKALFELAKEKGSLDEVEEDLEALKAVLAENPDLREFLSNPLISAEEKKALLKAVFGG-KLSELTKNFLKLLAEN   79 (171)
T ss_pred             CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHC
T ss_conf             964789999999987499999999999999999649899998659887999999999998510-0679999999999874


Q ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCHHCEEEEEECCEEEEHH
Q ss_conf             20110142499999998887655533101056899899999999999974895899999974140238999799785027
Q gi|254780618|r   91 GRLSVLPAIIKSFRAVCMYYRNEVMAFVRAFSGLSLLQQNKLGECLEKIVGKTVILDVMEDSALMGGFIVEIGAHQIDAS  170 (186)
Q Consensus        91 ~r~~~l~~I~~~f~~~~~~~~~~~~~~V~sa~~ls~~~~~~i~~~l~~~~~~~i~l~~~vD~slIGG~~i~vg~~~iD~S  170 (186)
T Consensus        80 ~R~~~l~~I~~~f~~l~~~~~~~~~~~V~sA~~Ls~~q~~~i~~~L~~~~~~~v~l~~~vD~slIGG~~i~igd~viD~S  159 (171)
T pfam00213        80 GRLSLLPEIAEEFEELYNEHRGIVEATVTSAVPLSEEQLKALKAALEKKTGKKVKLETKVDPSLIGGVVVRVGDKVIDGS  159 (171)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCEEEEEECCEEEEHH
T ss_conf             55111899999999999997597589999727999999999999999885556541666870140727999999987587


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999985
Q gi|254780618|r  171 LRTQLLKLGCIL  182 (186)
Q Consensus       171 i~~kL~~l~~~l  182 (186)
T Consensus       160 i~~~L~~l~~~L  171 (171)
T pfam00213       160 VRGKLERLKRAL  171 (171)
T ss_pred             HHHHHHHHHHCC
T ss_conf             999999999629