HHSEARCH alignment of GI: 254780618 and SCOP domain: d2dm9a1

Alignment

Probab=95.21  E-value=0.025  Score=32.90  Aligned_cols=59  Identities=24%  Similarity=0.328  Sum_probs=40.8

Q ss_pred             CCHHHHHHHHHHHHHHHCCEEEEEEEECCCHHCEEEEEE--CCEEEEHHHHHHHHHHHHHHH
Q ss_conf             998999999999999748958999999741402389997--997850279999999999852
Q gi|254780618|r  124 LSLLQQNKLGECLEKIVGKTVILDVMEDSALMGGFIVEI--GAHQIDASLRTQLLKLGCILK  183 (186)
Q Consensus       124 ls~~~~~~i~~~l~~~~~~~i~l~~~vD~slIGG~~i~v--g~~~iD~Si~~kL~~l~~~l~  183 (186)
                      -+.+....+...+.+.++ .+.+...-+++++|||++..  |.-.+|.|+.++|+..+..+.
T Consensus        49 ~D~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~GGvil~s~dG~I~vdnTle~rl~~~~e~~~  109 (118)
T d2dm9a1          49 KTLGLIASRIEEIKSELG-DVSIELGETVDTMGGVIVETEDGRIRIDNTFEARMERFEGEIR  109 (118)
T ss_dssp             HHHHHHHHTHHHHHHHCT-TCEEEECCCCCCSSEEEEEETTSSCEEEEEHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCCCEEEEECCCCEEEECCHHHHHHHHHHHHH
T ss_conf             249999999999998707-7526758987667878999669988997759999999999849

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: V-type ATPase subunit E-like
family: V-type ATPase subunit E
domain: V-type ATP synthase subunit E
species: Pyrococcus horikoshii [TaxId: 53953]