HHsearch alignment for GI: 254780619 and conserved domain: COG1435

>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism].
Probab=94.60  E-value=0.3  Score=28.61  Aligned_cols=105  Identities=25%  Similarity=0.336  Sum_probs=65.0

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCE
Q ss_conf             19984475315799999999998514684799715210013445554303897689962355723566789999719973
Q gi|254780619|r  220 VSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTSAILERFQKRFGVKPAEWHSSLSTSMREKIWRQVARGAIS  299 (731)
Q Consensus       220 ~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~v~HS~ls~~eR~~~w~~i~~G~~~  299 (731)
T Consensus         6 l~~i~gpM~SGKT~eLl~r~~~~~~~g~~v~vfkp~iD----------~R~~~~~V~Sr~G~~~~--------------A   61 (201)
T COG1435           6 LEFIYGPMFSGKTEELLRRARRYKEAGMKVLVFKPAID----------TRYGVGKVSSRIGLSSE--------------A   61 (201)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCC----------CCCCCCEEEECCCCCCC--------------C
T ss_conf             99997157686359999999999975980899852533----------53564336531587665--------------3


Q ss_pred             EEEECCHHHHHHHCC------CEEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHCCCCEECC
Q ss_conf             999400121100100------013677405532100002443224899999751103210000
Q gi|254780619|r  300 VIVGVRSALFLPFKK------LGLIVIDEEHDISYKQEEGILYNARDMSIVRGKIESFPVVLV  356 (731)
Q Consensus       300 IVIGtRSAif~P~~n------LglIIvDEEHd~sykq~~~pry~aRdvA~~Ra~~~~~~lilg  356 (731)
T Consensus        62 ~~i~~~~~i~~~i~~~~~~~~~~~v~IDEaQ---F~~~-----~~v~~l~~lad~lgi~Vi~~  116 (201)
T COG1435          62 VVIPSDTDIFDEIAALHEKPPVDCVLIDEAQ---FFDE-----ELVYVLNELADRLGIPVICY  116 (201)
T ss_pred             EECCCHHHHHHHHHHCCCCCCCCEEEEEHHH---HCCH-----HHHHHHHHHHHHCCCEEEEE
T ss_conf             5638757899999851347875789996167---1897-----89999999986149889995