HHsearch alignment for GI: 254780619 and conserved domain: COG1643

>COG1643 HrpA HrpA-like helicases [DNA replication, recombination, and repair].

Probab=98.17  E-value=5.2e-05  Score=57.40  Aligned_cols=59  Identities=17%  Similarity=0.319  Sum_probs=32.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHC-CCC--CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             8479971521001344555430-389--7689962355723566789999719973999400
Q gi|254780619|r  247 KQVLILLPEISLTSAILERFQK-RFG--VKPAEWHSSLSTSMREKIWRQVARGAISVIVGVR  305 (731)
Q Consensus       247 kqvLiLvPEI~Lt~Q~~~rl~~-rF~--~~v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGtR  305 (731)
T Consensus       260 GdILvFLpG~~EI~~~~~~L~~~~l~~~~~i~PLy~~L~~~eQ~rvF~p~~~~~RKVVlATN  321 (845)
T COG1643         260 GSILVFLPGQREIERTAEWLEKAELGDDLEILPLYGALSAEEQVRVFEPAPGGKRKVVLATN  321 (845)
T ss_pred             CCEEEECCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCEEEEECC
T ss_conf             98899778689999999999732447883894040359989998662878888604999751