HHsearch alignment for GI: 254780619 and conserved domain: KOG0335
>KOG0335 consensus.
Probab=99.01 E-value=1.1e-07 Score=77.85 Aligned_cols=326 Identities=19% Similarity=0.171 Sum_probs=167.2
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH-HHHHHHHC------------CCCEEEEECCCHHHHHHHH
Q ss_conf 6883789999999875204896199844753157999999-99998514------------6847997152100134455
Q gi|254780619|r 198 ILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLE-IVAAVLHL------------GKQVLILLPEISLTSAILE 264 (731)
Q Consensus 198 ~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~-li~~~L~~------------GkqvLiLvPEI~Lt~Q~~~ 264 (731)
T Consensus 96 ~ptpvQk~sip~i~~G-----rdlmacAqTGsGKT~aFLiPii~~~~~~~~~~~~~~~~~~~P~~lIlapTReL~~Qi~n 170 (482)
T KOG0335 96 KPTPVQKYSIPIISGG-----RDLMACAQTGSGKTAAFLIPIISYLLDEGPEDRGESGGGVYPRALILAPTRELVDQIYN 170 (482)
T ss_pred CCCCCEECCCCEEECC-----CCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH
T ss_conf 8986156042244258-----84278825788513788888999998648656665677889725998173787667888
Q ss_pred HHHCCC---CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHH-------HHHCCCEEEEEEECCCCCCHHC-CC
Q ss_conf 543038---976899623557235667899997199739994001211-------0010001367740553210000-24
Q gi|254780619|r 265 RFQKRF---GVKPAEWHSSLSTSMREKIWRQVARGAISVIVGVRSALF-------LPFKKLGLIVIDEEHDISYKQE-EG 333 (731)
Q Consensus 265 rl~~rF---~~~v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGtRSAif-------~P~~nLglIIvDEEHd~sykq~-~~ 333 (731)
T Consensus 171 ea~k~~~~s~~~~~~~ygg--~~~~-~q~~~~~~-gcdIlvaTpGrL~d~~e~g~i~l~~~k~~vLDEAD-r--MlD~mg 243 (482)
T KOG0335 171 EARKFSYLSGMKSVVVYGG--TDLG-AQLRFIKR-GCDILVATPGRLKDLIERGKISLDNCKFLVLDEAD-R--MLDEMG 243 (482)
T ss_pred HHHHHCCCCCCEEEEEECC--CCHH-HHHHHHCC-CCCEEEECCCHHHHHHHCCEEEHHHCCEEEECCHH-H--HHHHCC
T ss_conf 8876402212203300578--4454-42233325-75578855750564554151126238589952367-7--666326
Q ss_pred CCCCHHHHHHHHHH---HCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHH
Q ss_conf 43224899999751---103210000245432467753212344412432236765433211022223322245479899
Q gi|254780619|r 334 ILYNARDMSIVRGK---IESFPVVLVSATPSIESRVNGISRRYHSVHLSTRYRNSALPHLQVIDMRGQTIAQGKSLSPEM 410 (731)
Q Consensus 334 pry~aRdvA~~Ra~---~~~~~lilgSATPSles~~~~~~g~~~~~~l~~R~~~~~~P~i~ivDm~~~~~~~~~~lS~~l 410 (731)
T Consensus 244 F~p~Ir~Iv~~~~~~~~~~~qt~mF-SAtfp~~iq~l------------------------------------------- 279 (482)
T KOG0335 244 FEPQIRKIVEQLGMPPKNNRQTLLF-SATFPKEIQRL------------------------------------------- 279 (482)
T ss_pred CCHHHHHHHCCCCCCCCCCEEEEEE-ECCCCHHHHHH-------------------------------------------
T ss_conf 6620799962558887466137887-35577566644-------------------------------------------
Q ss_pred HHHHHHHHCCCCEEEEEECCCCEEHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEECHHHCCCCCCCCCCCCC-----CC
Q ss_conf 9999886226551799742220000002356543431014652012113578320000210244655566678-----74
Q gi|254780619|r 411 IDGIRHTLARNEQTLLFLNRRGYAPLTLCQVCGNRLKCLHCSCWLVEHRSKKKLYCHQCGHSAIYSQSCVVCG-----SS 485 (731)
Q Consensus 411 ~~~i~~~l~~g~qvll~lnRrGya~~~~C~~Cg~~~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~~~~~~Cp~Cg-----~~ 485 (731)
T Consensus 280 ---~~~fl~~~-yi~laV~rvg~~~-------~ni~q~----i~~V~---~~~kr~~Lldll-~~~~~~~~~~~~~~e~t 340 (482)
T KOG0335 280 ---AADFLKDN-YIFLAVGRVGSTS-------ENITQK----ILFVN---EMEKRSKLLDLL-NKDDGPPSDGEPKWEKT 340 (482)
T ss_pred ---HHHHHHHC-CEEEEEEEECCCC-------CCCEEE----EEEEC---CHHHHHHHHHHH-HCCCCCCCCCCCCCCEE
T ss_conf ---78876415-1388875304666-------563467----66421---113578999886-13467866577643138
Q ss_pred CEECCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 11001354289988885204852000102321135867899999862125765798704430231134520123300034
Q gi|254780619|r 486 GKMIACGFGIERIAEEVCEYFPLARISILSSDLEGGGGRLQLQLSAIAKGEIDIIIGTQLVAKGHNFPRMSLVGVVDGDL 565 (731)
Q Consensus 486 ~~l~~~G~Gte~~~e~l~~~fp~~~v~~~d~d~~~~~~~~~~~~~~~~~~~~~ilvgTq~i~kg~~fp~v~lv~il~aD~ 565 (731)
T Consensus 341 lvFvEt~~~~d~l~~~l~~~~~~--~~sIhg~--~tq~er~~al~~Fr~g~~pvlVaT~VaaRGlDi~~V~hVInyDmP~ 416 (482)
T KOG0335 341 LVFVETKRGADELAAFLSSNGYP--AKSIHGD--RTQIEREQALNDFRNGKAPVLVATNVAARGLDIPNVKHVINYDMPA 416 (482)
T ss_pred EEEEECCHHHHHHHHHHHCCCCC--CEEECCH--HHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCEEEEEECCC
T ss_conf 99961300326999998617987--4560332--5563799998776469866798703665478876874358863675
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHH
Q ss_conf 4310245578999998754311025667886899993298648889999
Q gi|254780619|r 566 GLTNADLRSSERTFQLLSQVTGRAGRFGLKSLGLIQAYQPTHPVMQALV 614 (731)
Q Consensus 566 ~l~~pd~ra~E~~~qll~qv~gRagr~~~~g~v~iQt~~p~~~~~~~~~ 614 (731)
T Consensus 417 d--~d~Y----------vHRIGRTGR~Gn~G~atsf~n~~~~~i~~~L~ 453 (482)
T KOG0335 417 D--IDDY----------VHRIGRTGRVGNGGRATSFFNEKNQNIAKALV 453 (482)
T ss_pred C--HHHH----------HHHCCCCCCCCCCCEEEEEECCCCCHHHHHHH
T ss_conf 2--4667----------77415435577773268876474300689999