HHsearch alignment for GI: 254780619 and conserved domain: KOG0340

Probab=93.27  E-value=0.53  Score=26.75  Aligned_cols=74  Identities=26%  Similarity=0.422  Sum_probs=46.8

Q ss_pred             HHHHHHCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE-EEECCC
Q ss_conf             9998621257657987044302311345201233000344310245578999998754311025667886899-993298
Q gi|254780619|r  527 LQLSAIAKGEIDIIIGTQLVAKGHNFPRMSLVGVVDGDLGLTNADLRSSERTFQLLSQVTGRAGRFGLKSLGL-IQAYQP  605 (731)
Q Consensus       527 ~~~~~~~~~~~~ilvgTq~i~kg~~fp~v~lv~il~aD~~l~~pd~ra~E~~~qll~qv~gRagr~~~~g~v~-iQt~~p  605 (731)
T Consensus       295 ~aLsrFrs~~~~iliaTDVAsRGLDIP~V~LVvN~diPr---~P------~~y--iH-RvGRtARAGR~G~aiSivt-~r  361 (442)
T KOG0340         295 AALSRFRSNAARILIATDVASRGLDIPTVELVVNHDIPR---DP------KDY--IH-RVGRTARAGRKGMAISIVT-QR  361 (442)
T ss_pred             HHHHHHHHCCCCEEEEECHHHCCCCCCCEEEEEECCCCC---CH------HHH--HH-HHCCHHCCCCCCCEEEEEC-HH
T ss_conf             899877626740899731343278988446787068899---87------888--87-6030120567764289862-42


Q ss_pred             CCHHHHHH
Q ss_conf             64888999
Q gi|254780619|r  606 THPVMQAL  613 (731)
Q Consensus       606 ~~~~~~~~  613 (731)
T Consensus       362 Dv~l~~ai  369 (442)
T KOG0340         362 DVELLQAI  369 (442)
T ss_pred             HHHHHHHH
T ss_conf             27999999