HHsearch alignment for GI: 254780619 and conserved domain: KOG0341
>KOG0341 consensus.
Probab=97.06 E-value=0.0014 Score=46.52 Aligned_cols=96 Identities=22% Similarity=0.350 Sum_probs=59.1
Q ss_pred HHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE--EE
Q ss_conf 7899999862125765798704430231134520123300034431024557899999875431102566788689--99
Q gi|254780619|r 523 GRLQLQLSAIAKGEIDIIIGTQLVAKGHNFPRMSLVGVVDGDLGLTNADLRSSERTFQLLSQVTGRAGRFGLKSLG--LI 600 (731)
Q Consensus 523 ~~~~~~~~~~~~~~~~ilvgTq~i~kg~~fp~v~lv~il~aD~~l~~pd~ra~E~~~qll~qv~gRagr~~~~g~v--~i 600 (731)
T Consensus 458 edR~~ai~afr~gkKDVLVATDVASKGLDFp~iqHVINyDM------P-----~eIEN-YVHRIGRTGRsg~~GiATTfI 525 (610)
T KOG0341 458 EDRHYAIEAFRAGKKDVLVATDVASKGLDFPDIQHVINYDM------P-----EEIEN-YVHRIGRTGRSGKTGIATTFI 525 (610)
T ss_pred HHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCHHHCCCCC------H-----HHHHH-HHHHHCCCCCCCCCCEEEEEE
T ss_conf 67888999986578745887310003689745044404788------0-----88999-999712467788864022211
Q ss_pred EECCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHEE
Q ss_conf 93298648889999589799999999999981888801189
Q gi|254780619|r 601 QAYQPTHPVMQALVSGDADSFYESEIRARESVNLPPFGRLA 641 (731)
Q Consensus 601 Qt~~p~~~~~~~~~~~d~~~f~~~el~~R~~~~~PPf~~~~ 641 (731)
T Consensus 526 NK~~-~esvLlD---------LK~LL~EakQ~-vP~~L~~L 555 (610)
T KOG0341 526 NKNQ-EESVLLD---------LKHLLQEAKQE-VPPVLAEL 555 (610)
T ss_pred CCCC-HHHHHHH---------HHHHHHHHHCC-CCHHHHHH
T ss_conf 4563-1888987---------99999986510-88799974