HHsearch alignment for GI: 254780619 and conserved domain: KOG0348
>KOG0348 consensus.
Probab=99.22 E-value=1.6e-09 Score=92.00 Aligned_cols=347 Identities=19% Similarity=0.261 Sum_probs=180.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH---------CCCCEEEEECCCHHHHHHHHHHHC
Q ss_conf 68837899999998752048961998447531579999999999851---------468479971521001344555430
Q gi|254780619|r 198 ILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLH---------LGKQVLILLPEISLTSAILERFQK 268 (731)
Q Consensus 198 ~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L~---------~GkqvLiLvPEI~Lt~Q~~~rl~~ 268 (731)
T Consensus 159 ~pTsVQkq~IP~lL~g-----rD~lV~aQTGSGKTLAYllPiVq~Lq~m~~ki~Rs~G~~ALVivPTREL~~Q~y~~~qK 233 (708)
T KOG0348 159 APTSVQKQAIPVLLEG-----RDALVRAQTGSGKTLAYLLPIVQSLQAMEPKIQRSDGPYALVIVPTRELALQIYETVQK 233 (708)
T ss_pred CCCHHHHCCHHHHHCC-----CCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHH
T ss_conf 6406765020355258-----63478857788621799999999997268655556883489980419999999999998
Q ss_pred CCCCEEEEEECCC-CCHHHHHHHHHHHCCCCEEEEECCHHHH--------HHHCCCEEEEEEECC---CCCCHHCCCCCC
Q ss_conf 3897689962355-7235667899997199739994001211--------001000136774055---321000024432
Q gi|254780619|r 269 RFGVKPAEWHSSL-STSMREKIWRQVARGAISVIVGVRSALF--------LPFKKLGLIVIDEEH---DISYKQEEGILY 336 (731)
Q Consensus 269 rF~~~v~v~HS~l-s~~eR~~~w~~i~~G~~~IVIGtRSAif--------~P~~nLglIIvDEEH---d~sykq~~~pry 336 (731)
T Consensus 234 Ll~~~hWIVPg~lmGGEkkKSEKARLRKG-iNILIgTPGRLvDHLknT~~i~~s~LRwlVlDEaDrlleLGfe------- 305 (708)
T KOG0348 234 LLKPFHWIVPGVLMGGEKKKSEKARLRKG-INILIGTPGRLVDHLKNTKSIKFSRLRWLVLDEADRLLELGFE------- 305 (708)
T ss_pred HHCCCEEEEECEEECCCCCCCHHHHHHCC-CEEEECCCHHHHHHHHCCCHHEEEEEEEEEECCHHHHHHCCCH-------
T ss_conf 72574377302122363310178887548-5489758427889874300221003568985343678762430-------
Q ss_pred CHHHHHHHHHHH--------CC--CC----EECCCCCCCHH--HHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCC
Q ss_conf 248999997511--------03--21----00002454324--6775321234441243223676543321102222332
Q gi|254780619|r 337 NARDMSIVRGKI--------ES--FP----VVLVSATPSIE--SRVNGISRRYHSVHLSTRYRNSALPHLQVIDMRGQTI 400 (731)
Q Consensus 337 ~aRdvA~~Ra~~--------~~--~~----lilgSATPSle--s~~~~~~g~~~~~~l~~R~~~~~~P~i~ivDm~~~~~ 400 (731)
T Consensus 306 --kdit~Il~~v~~~~~~e~~~~~lp~q~q~mLlSATLtd~V~rLa~~sLkDpv~I~ld~s~-~~~~p~~~a~~ev~~~~ 382 (708)
T KOG0348 306 --KDITQILKAVHSIQNAECKDPKLPHQLQNMLLSATLTDGVNRLADLSLKDPVYISLDKSH-SQLNPKDKAVQEVDDGP 382 (708)
T ss_pred --HHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH-HHCCCCHHHHHHCCCCC
T ss_conf --039999998750020010255663787767666556777888763315685564043012-20386314566337753
Q ss_pred CCC----CCCCHHHH----------------HHHHHHHC--CCCEEEEEECCCCEEHHCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 224----54798999----------------99988622--655179974222000000235654343101465201211
Q gi|254780619|r 401 AQG----KSLSPEMI----------------DGIRHTLA--RNEQTLLFLNRRGYAPLTLCQVCGNRLKCLHCSCWLVEH 458 (731)
Q Consensus 401 ~~~----~~lS~~l~----------------~~i~~~l~--~g~qvll~lnRrGya~~~~C~~Cg~~~~C~~C~~~l~~h 458 (731)
T Consensus 383 ~~~~l~~~~iPeqL~qry~vVPpKLRLV~Laa~L~~~~k~~~~qk~iVF~---------S------------~~d~VeFH 441 (708)
T KOG0348 383 AGDKLDSFAIPEQLLQRYTVVPPKLRLVALAALLLNKVKFEEKQKMIVFF---------S------------CSDSVEFH 441 (708)
T ss_pred CCCCCCCCCCCHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHCEEEEEE---------E------------CHHHHHHH
T ss_conf 45632012386876500685287410899999999986544423069999---------6------------32578999
Q ss_pred CCCCCCEECHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 35783200002102446555666787411001354289988885204852000102321135867899999862125765
Q gi|254780619|r 459 RSKKKLYCHQCGHSAIYSQSCVVCGSSGKMIACGFGIERIAEEVCEYFPLARISILSSDLEGGGGRLQLQLSAIAKGEID 538 (731)
Q Consensus 459 ~~~~~l~Ch~Cg~~~~~~~~Cp~Cg~~~~l~~~G~Gte~~~e~l~~~fp~~~v~~~d~d~~~~~~~~~~~~~~~~~~~~~ 538 (731)
T Consensus 442 y--~lf~~~l~-------~~--~e~~s~~~~s~g---------~~~l~~~~k~~rLHGsm~--QeeRts~f~~Fs~~~~~ 499 (708)
T KOG0348 442 Y--SLFSEALL-------SH--LEGSSGAPDSEG---------LPPLFMDLKFYRLHGSME--QEERTSVFQEFSHSRRA 499 (708)
T ss_pred H--HHHHHHHH-------CC--CCCCCCCCCCCC---------CHHHHHCCEEEEECCCHH--HHHHHHHHHHHCCCCCE
T ss_conf 9--99986540-------23--236667866679---------810331463788427434--88999998753035442
Q ss_pred EEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC-CCHHHHHHHHC
Q ss_conf 7987044302311345201233000344310245578999998754311025667886899993298-64888999958
Q gi|254780619|r 539 IIIGTQLVAKGHNFPRMSLVGVVDGDLGLTNADLRSSERTFQLLSQVTGRAGRFGLKSLGLIQAYQP-THPVMQALVSG 616 (731)
Q Consensus 539 ilvgTq~i~kg~~fp~v~lv~il~aD~~l~~pd~ra~E~~~qll~qv~gRagr~~~~g~v~iQt~~p-~~~~~~~~~~~ 616 (731)
T Consensus 500 VLLcTDVAaRGLDlP~V~~vVQYd~P-------~s~ady----lH-RvGRTARaG~kG~alLf-L~P~Eaey~~~l~~~ 565 (708)
T KOG0348 500 VLLCTDVAARGLDLPHVGLVVQYDPP-------FSTADY----LH-RVGRTARAGEKGEALLF-LLPSEAEYVNYLKKH 565 (708)
T ss_pred EEEEHHHHHCCCCCCCCCEEEEECCC-------CCHHHH----HH-HHHHHHHCCCCCCEEEE-ECCCHHHHHHHHHHH
T ss_conf 78850345426888776769982799-------988999----99-84045434677715788-665179999988750