HHsearch alignment for GI: 254780619 and conserved domain: KOG0352
>KOG0352 consensus.
Probab=98.56 E-value=4.8e-06 Score=65.32 Aligned_cols=333 Identities=20% Similarity=0.243 Sum_probs=185.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 88378999999987520489619984475315799999999998514684799715210013445554303897689962
Q gi|254780619|r 199 LDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTSAILERFQKRFGVKPAEWH 278 (731)
Q Consensus 199 Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~v~H 278 (731)
T Consensus 21 Ks~LQE~A~~c~VK~k~----DVyVsMPTGaGKSLCyQ-L-PaL~~~g-ITIV~SPLiALIkDQiDHL~~-LKVp~~SLN 92 (641)
T KOG0352 21 KSRLQEQAINCIVKRKC----DVYVSMPTGAGKSLCYQ-L-PALVHGG-ITIVISPLIALIKDQIDHLKR-LKVPCESLN 92 (641)
T ss_pred CCHHHHHHHHHHHHCCC----CEEEECCCCCCHHHHHH-C-HHHHHCC-EEEEECHHHHHHHHHHHHHHH-HCCCHHHHH
T ss_conf 37578998999883467----37996468876014542-6-5877288-189930789999999877874-056166640
Q ss_pred CCCCCHHHHHHHHHHHCCCCEE---EEEC---CHHHHHHH-------CCCEEEEEEECCCCCCH-HCCCCCCCHHHHHHH
Q ss_conf 3557235667899997199739---9940---01211001-------00013677405532100-002443224899999
Q gi|254780619|r 279 SSLSTSMREKIWRQVARGAISV---IVGV---RSALFLPF-------KKLGLIVIDEEHDISYK-QEEGILYNARDMSIV 344 (731)
Q Consensus 279 S~ls~~eR~~~w~~i~~G~~~I---VIGt---RSAif~P~-------~nLglIIvDEEHd~syk-q~~~pry~aRdvA~~ 344 (731)
T Consensus 93 SKlSt~ER~ri~~DL~~ekp~~K~LYITPE~AAt~~FQ~lLn~L~~r~~L~Y~vVDEAHCVSQWGHDFRP--DYL~LG~L 170 (641)
T KOG0352 93 SKLSTVERSRIMGDLAKEKPTIKMLYITPEGAATDGFQKLLNGLANRDVLRYIVVDEAHCVSQWGHDFRP--DYLTLGSL 170 (641)
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCEEEEEEECHHHHHHHHCCCCCC--CHHHHHHH
T ss_conf 1210788999988887437751489976315556668999998874140224773346667762666682--04446667
Q ss_pred HHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE---CC--CCCCCCCCCCCCCHHH---HHHHHH
Q ss_conf 751103210000245432467753212344412432236765433211---02--2223322245479899---999988
Q gi|254780619|r 345 RGKIESFPVVLVSATPSIESRVNGISRRYHSVHLSTRYRNSALPHLQV---ID--MRGQTIAQGKSLSPEM---IDGIRH 416 (731)
Q Consensus 345 Ra~~~~~~lilgSATPSles~~~~~~g~~~~~~l~~R~~~~~~P~i~i---vD--m~~~~~~~~~~lS~~l---~~~i~~ 416 (731)
T Consensus 171 RS~~~~vpwvALTATA~~~V----qEDi~~qL~L~~PVAiFkTP~FR~NLFYD~~~K-------~~I~D~~~~LaDF~~~ 239 (641)
T KOG0352 171 RSVCPGVPWVALTATANAKV----QEDIAFQLKLRNPVAIFKTPTFRDNLFYDNHMK-------SFITDCLTVLADFSSS 239 (641)
T ss_pred HHHCCCCCEEEEECCCCHHH----HHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHH-------HHHCCHHHHHHHHHHH
T ss_conf 74469996698543467767----799999976058544405741454445788888-------7641377789999998
Q ss_pred HHCCCCEEEEEECCCCEEHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEECHHHCCCCCCCCCCCCCCCCEECCCCCCHH
Q ss_conf 62265517997422200000023565434310146520121135783200002102446555666787411001354289
Q gi|254780619|r 417 TLARNEQTLLFLNRRGYAPLTLCQVCGNRLKCLHCSCWLVEHRSKKKLYCHQCGHSAIYSQSCVVCGSSGKMIACGFGIE 496 (731)
Q Consensus 417 ~l~~g~qvll~lnRrGya~~~~C~~Cg~~~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~~~~~~Cp~Cg~~~~l~~~G~Gte 496 (731)
T Consensus 240 ~LG~--~~~~~~~~K~~~G---------------CGI--V-----------YCRTR----~~cEq~A--I~l~~~Gi~A~ 283 (641)
T KOG0352 240 NLGK--HEKASQNKKTFTG---------------CGI--V-----------YCRTR----NECEQVA--IMLEIAGIPAM 283 (641)
T ss_pred HCCC--CHHHHCCCCCCCC---------------CEE--E-----------EECCH----HHHHHHH--HHHHHCCCCHH
T ss_conf 6289--0444117877777---------------327--9-----------96028----8999898--87532476267
Q ss_pred HHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98888520485200010232113586789999986212576579870443023113452012330003443102455789
Q gi|254780619|r 497 RIAEEVCEYFPLARISILSSDLEGGGGRLQLQLSAIAKGEIDIIIGTQLVAKGHNFPRMSLVGVVDGDLGLTNADLRSSE 576 (731)
Q Consensus 497 ~~~e~l~~~fp~~~v~~~d~d~~~~~~~~~~~~~~~~~~~~~ilvgTq~i~kg~~fp~v~lv~il~aD~~l~~pd~ra~E 576 (731)
T Consensus 284 AYHAGLK------------------~~ERTeVQe~WM~~~~PvI~AT~SFGMGVDKp~VRFViHW~~~------------ 333 (641)
T KOG0352 284 AYHAGLK------------------KKERTEVQEKWMNNEIPVIAATVSFGMGVDKPDVRFVIHWSPS------------ 333 (641)
T ss_pred HHHHHCC------------------CCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCHH------------
T ss_conf 7650014------------------1126889999862788779996024446687761599951705------------
Q ss_pred HHHHHHHHHHHCCCCCCCCCEEEE-EECCCCCHHHHHHHHCCHH
Q ss_conf 999987543110256678868999-9329864888999958979
Q gi|254780619|r 577 RTFQLLSQVTGRAGRFGLKSLGLI-QAYQPTHPVMQALVSGDAD 619 (731)
Q Consensus 577 ~~~qll~qv~gRagr~~~~g~v~i-Qt~~p~~~~~~~~~~~d~~ 619 (731)
T Consensus 334 qn~AgYYQESGRAGRDGk~SyCRLYYsR~-D~~~i~FLi~~e~a 376 (641)
T KOG0352 334 QNLAGYYQESGRAGRDGKRSYCRLYYSRQ-DKNALNFLVSGELA 376 (641)
T ss_pred HHHHHHHHHCCCCCCCCCCCCEEEEECCC-CHHHHHHHHHHHHH
T ss_conf 65789988615356677725201333214-05777799776789