HHsearch alignment for GI: 254780619 and conserved domain: KOG0354
>KOG0354 consensus.
Probab=99.41 E-value=2.3e-10 Score=98.40 Aligned_cols=380 Identities=18% Similarity=0.144 Sum_probs=188.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHC--CCCEEEEECCCHHHHHHHHHHHCCC-
Q ss_conf 4666688378999999987520489619984475315799999999998514--6847997152100134455543038-
Q gi|254780619|r 194 FSLPILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLHL--GKQVLILLPEISLTSAILERFQKRF- 270 (731)
Q Consensus 194 ~~~~~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L~~--GkqvLiLvPEI~Lt~Q~~~rl~~rF- 270 (731)
T Consensus 58 p~~~~lR~YQ~eivq~AL------gkNtii~lPTG~GKTfIAa~Vm~nh~rw~p~~KiVF~aP~~pLv~QQ~a~~~~~~~ 131 (746)
T KOG0354 58 PTNLELRNYQEELVQPAL------GKNTIIALPTGSGKTFIAAVIMKNHFEWRPKGKVVFLAPTRPLVNQQIACFSIYLI 131 (746)
T ss_pred CCCCCCCHHHHHHHHHHH------CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCC
T ss_conf 676656078999867862------68769995359986104799999997237764389960771178888988762067
Q ss_pred CCEEEEEECC-CCCHHHHHHHHHHHCCCCEEEEECC--------HHHHHHHCCCEEEEEEECCCCCCHHCCCCCCCHHHH
Q ss_conf 9768996235-5723566789999719973999400--------121100100013677405532100002443224899
Q gi|254780619|r 271 GVKPAEWHSS-LSTSMREKIWRQVARGAISVIVGVR--------SALFLPFKKLGLIVIDEEHDISYKQEEGILYNARDM 341 (731)
Q Consensus 271 ~~~v~v~HS~-ls~~eR~~~w~~i~~G~~~IVIGtR--------SAif~P~~nLglIIvDEEHd~sykq~~~pry~aRdv 341 (731)
T Consensus 132 ~~~~T~~l~~~~~~~~r~~i~~-----s~~vff~TpQil~ndL~~~~~~~ls~fs~iv~DE~Hra~---kn~~-Y~~Vmr 202 (746)
T KOG0354 132 PYSVTGQLGDTVPRSNRGEIVA-----SKRVFFRTPQILENDLKSGLHDELSDFSLIVFDECHRTS---KNHP-YNNIMR 202 (746)
T ss_pred CCCCEEECCCCCCCCCHHHHHC-----CCCEEEECHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC---CCCC-HHHHHH
T ss_conf 6010455057568876245310-----263589672763433254334545517999972224455---5661-799999
Q ss_pred HHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHH-CCCCCCCCC---CCC-----CCEECCCCCCCCCCCCCCCHHHHH
Q ss_conf 99975110321000024543246775321234441-243223676---543-----321102222332224547989999
Q gi|254780619|r 342 SIVRGKIESFPVVLVSATPSIESRVNGISRRYHSV-HLSTRYRNS---ALP-----HLQVIDMRGQTIAQGKSLSPEMID 412 (731)
Q Consensus 342 A~~Ra~~~~~~lilgSATPSles~~~~~~g~~~~~-~l~~R~~~~---~~P-----~i~ivDm~~~~~~~~~~lS~~l~~ 412 (731)
T Consensus 203 ~~l~~k~~~~qILgLTASpG-~~~~~v~~~I~~L~asldvr~~ssi~~~y~~lr~~~~i~v~~~~~~~~----~~~~f~~ 277 (746)
T KOG0354 203 EYLDLKNQGNQILGLTASPG-SKLEQVQNVIDNLCASLDVRTESSIKSNYEELREHVQIPVDLSLCERD----IEDPFGM 277 (746)
T ss_pred HHHHHHHCCCCEEEEECCCC-CCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH----HHHHHHH
T ss_conf 99986514661799855888-458999999985203325550445654189872467524758876411----3436999
Q ss_pred HHHHHHCC--CCEEEEEECCCC--EEHHCC--C--CCCCCCCCCCCC--CCEEEEECCCCCCEECHHH----CCCCCCCC
Q ss_conf 99886226--551799742220--000002--3--565434310146--5201211357832000021----02446555
Q gi|254780619|r 413 GIRHTLAR--NEQTLLFLNRRG--YAPLTL--C--QVCGNRLKCLHC--SCWLVEHRSKKKLYCHQCG----HSAIYSQS 478 (731)
Q Consensus 413 ~i~~~l~~--g~qvll~lnRrG--ya~~~~--C--~~Cg~~~~C~~C--~~~l~~h~~~~~l~Ch~Cg----~~~~~~~~ 478 (731)
T Consensus 278 ~i~p~l~~l~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~f~~~~~~~~-~~~ll~~~gir~~~~l~~~-~~f 354 (746)
T KOG0354 278 IIEPLLQQLQEEG-LIEISDKSTSYEQWVVQAEKAAAPNGPENQRNCFYALHLRKY-NLALLISDGIRFVDALDYL-EDF 354 (746)
T ss_pred HHHHHHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH-HHHHHHHCCHHHHHHHHHH-HHH
T ss_conf 9999999998638-541024333444404330022236887432036789999987-8888763234037777655-543
Q ss_pred CCCCCCCC----------------------EECC---CC-CCHHHHHHHHHHCC---CCCHHHHCCC-------------
Q ss_conf 66678741----------------------1001---35-42899888852048---5200010232-------------
Q gi|254780619|r 479 CVVCGSSG----------------------KMIA---CG-FGIERIAEEVCEYF---PLARISILSS------------- 516 (731)
Q Consensus 479 Cp~Cg~~~----------------------~l~~---~G-~Gte~~~e~l~~~f---p~~~v~~~d~------------- 516 (731)
T Consensus 355 ~~e~~~~k~~~~~~e~~~~~~~~~~m~~~~~l~~~~~~~npkle~l~~~l~e~f~~~~dsR~IIFve~R~sa~~l~~~l~ 434 (746)
T KOG0354 355 YEEVALKKYLKLELEARLIRNFTENMNELEHLSLDPPKENPKLEKLVEILVEQFEQNPDSRTIIFVETRESALALKKWLL 434 (746)
T ss_pred CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHH
T ss_conf 00000467889874221067788988764432027876684699999999998605988507999732889999999997
Q ss_pred ----C----------------CCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----1----------------13586789999986212576579870443023113452012330003443102455789
Q gi|254780619|r 517 ----D----------------LEGGGGRLQLQLSAIAKGEIDIIIGTQLVAKGHNFPRMSLVGVVDGDLGLTNADLRSSE 576 (731)
Q Consensus 517 ----d----------------~~~~~~~~~~~~~~~~~~~~~ilvgTq~i~kg~~fp~v~lv~il~aD~~l~~pd~ra~E 576 (731)
T Consensus 435 ~~~~~~ir~~~fiGq~~s~~~~gmtqk~Q~evl~~Fr~G~~NvLVATSV~EEGLDI~ec~lVIcYd~---------~snp 505 (746)
T KOG0354 435 QLHELGIKAEIFIGQGKSTQSTGMTQKEQKEVLDKFRDGEINVLVATSVAEEGLDIGECNLVICYDY---------SSNP 505 (746)
T ss_pred HHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCEEEEECC---------CCCH
T ss_conf 5401354402156035445444457899999999985798027998101004677421128999657---------7668
Q ss_pred HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHH
Q ss_conf 9999875431102566788689999329864888
Q gi|254780619|r 577 RTFQLLSQVTGRAGRFGLKSLGLIQAYQPTHPVM 610 (731)
Q Consensus 577 ~~~qll~qv~gRagr~~~~g~v~iQt~~p~~~~~ 610 (731)
T Consensus 506 I---rmIQrrGR-gRa~-ns~~vll~t~~~~~~~ 534 (746)
T KOG0354 506 I---RMVQRRGR-GRAR-NSKCVLLTTGSEVIEF 534 (746)
T ss_pred H---HHHHHHCC-CCCC-CCEEEEEECCHHHHHH
T ss_conf 8---99998631-0101-8769999725168899