HHsearch alignment for GI: 254780619 and conserved domain: KOG0947
>KOG0947 consensus.
Probab=98.38 E-value=5.8e-06 Score=64.72 Aligned_cols=138 Identities=21% Similarity=0.334 Sum_probs=95.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 68837899999998752048961998447531579999999999851468479971521001344555430389768996
Q gi|254780619|r 198 ILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTSAILERFQKRFGVKPAEW 277 (731)
Q Consensus 198 ~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~v~ 277 (731)
T Consensus 297 elD~FQk~Ai~~le----rg~-SVFVAAHTSAGKTvVAEYAialaq~h~TR~iYTSPIKALSNQKfRDFk~tF~Dvg-Ll 370 (1248)
T KOG0947 297 ELDTFQKEAIYHLE----RGD-SVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFKETFGDVG-LL 370 (1248)
T ss_pred CCCHHHHHHHHHHH----CCC-EEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHCCCHHHHHHHHCCCCC-EE
T ss_conf 76678999999997----278-1799713778843699999999886355157526346540015788877426665-45
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEC----CHHHHH---HHCCCEEEEEEECCCCCCHHCC--CCCCCHHHHHHHHHHH
Q ss_conf 235572356678999971997399940----012110---0100013677405532100002--4432248999997511
Q gi|254780619|r 278 HSSLSTSMREKIWRQVARGAISVIVGV----RSALFL---PFKKLGLIVIDEEHDISYKQEE--GILYNARDMSIVRGKI 348 (731)
Q Consensus 278 HS~ls~~eR~~~w~~i~~G~~~IVIGt----RSAif~---P~~nLglIIvDEEHd~sykq~~--~pry~aRdvA~~Ra~~ 348 (731)
T Consensus 371 TGDvq-----------inPeAsCLIMTTEILRsMLYrgadliRDvE~VIFDEVH---YiND~eRGvVWE--EViIMlP~- 433 (1248)
T KOG0947 371 TGDVQ-----------INPEASCLIMTTEILRSMLYRGADLIRDVEFVIFDEVH---YINDVERGVVWE--EVIIMLPR- 433 (1248)
T ss_pred ECCEE-----------ECCCCCEEEEHHHHHHHHHHCCCCHHHCCCEEEEEEEE---ECCCCCCCCCCE--EEEEECCC-
T ss_conf 14433-----------27775467656999999875155432113369874035---414413562210--12253255-
Q ss_pred CCCCEECCCCC
Q ss_conf 03210000245
Q gi|254780619|r 349 ESFPVVLVSAT 359 (731)
Q Consensus 349 ~~~~lilgSAT 359 (731)
T Consensus 434 -HV~~IlLSAT 443 (1248)
T KOG0947 434 -HVNFILLSAT 443 (1248)
T ss_pred -CCEEEEEECC
T ss_conf -4159998465