HHsearch alignment for GI: 254780619 and conserved domain: KOG0950
>KOG0950 consensus.
Probab=97.32 E-value=0.0033 Score=43.67 Aligned_cols=136 Identities=25% Similarity=0.338 Sum_probs=76.1
Q ss_pred EEEEC-CCCHHHHHHHHH-HHHHHHHCCCCEEEEECCCHHHHHHHHH---HHCCCCCEEEEEECCCCCHHHHHHHHHHHC
Q ss_conf 99844-753157999999-9999851468479971521001344555---430389768996235572356678999971
Q gi|254780619|r 221 SLISG-VTGSGKTEVYLE-IVAAVLHLGKQVLILLPEISLTSAILER---FQKRFGVKPAEWHSSLSTSMREKIWRQVAR 295 (731)
Q Consensus 221 ~LL~G-vTGSGKTEVYl~-li~~~L~~GkqvLiLvPEI~Lt~Q~~~r---l~~rF~~~v~v~HS~ls~~eR~~~w~~i~~ 295 (731)
T Consensus 242 nliys~Pts~gktlvaeilml~~~l~~rr~~llilp~vsiv~Ek~~~l~~~~~~~G~~ve~y~g~~~p~~~~k------- 314 (1008)
T KOG0950 242 NLIYSLPTSAGKTLVAEILMLREVLCRRRNVLLILPYVSIVQEKISALSPFSIDLGFPVEEYAGRFPPEKRRK------- 314 (1008)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEECCEEEHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCC-------
T ss_conf 5588578764067999999999998874211674242102587776400220335886221126689988644-------
Q ss_pred CCCEEEEEC--CHHHH-------HHHCCCEEEEEEECCCCCCHHCCCCCCCHHH-HHH--HHHHHCCCCEECCCCC-C--
Q ss_conf 997399940--01211-------0010001367740553210000244322489-999--9751103210000245-4--
Q gi|254780619|r 296 GAISVIVGV--RSALF-------LPFKKLGLIVIDEEHDISYKQEEGILYNARD-MSI--VRGKIESFPVVLVSAT-P-- 360 (731)
Q Consensus 296 G~~~IVIGt--RSAif-------~P~~nLglIIvDEEHd~sykq~~~pry~aRd-vA~--~Ra~~~~~~lilgSAT-P-- 360 (731)
T Consensus 315 -~~sv~i~tiEkanslin~lie~g~~~~~g~vvVdElhmi~---d~~rg~~lE~~l~k~~y~~~~~~~~iIGMSATi~N~ 390 (1008)
T KOG0950 315 -RESVAIATIEKANSLINSLIEQGRLDFLGMVVVDELHMIG---DKGRGAILELLLAKILYENLETSVQIIGMSATIPNN 390 (1008)
T ss_pred -CEEEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEE---CCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCH
T ss_conf -1045542037667688888761783304728975224640---356355899999999996325634676552414774
Q ss_pred -CHHHHHH
Q ss_conf -3246775
Q gi|254780619|r 361 -SIESRVN 367 (731)
Q Consensus 361 -Sles~~~ 367 (731)
T Consensus 391 ~lL~~~L~ 398 (1008)
T KOG0950 391 SLLQDWLD 398 (1008)
T ss_pred HHHHHHHH
T ss_conf 88998864