HHsearch alignment for GI: 254780619 and conserved domain: PRK00254

>PRK00254 ski2-like helicase; Provisional.
Probab=91.38  E-value=0.83  Score=25.27  Aligned_cols=83  Identities=20%  Similarity=0.240  Sum_probs=55.1

Q ss_pred             HHHHHHHHHCCCCEEEEECCCHHHHH----HHHHH----------------------------HCCCCCEEEEEECCCCC
Q ss_conf             99999985146847997152100134----45554----------------------------30389768996235572
Q gi|254780619|r  236 LEIVAAVLHLGKQVLILLPEISLTSA----ILERF----------------------------QKRFGVKPAEWHSSLST  283 (731)
Q Consensus       236 l~li~~~L~~GkqvLiLvPEI~Lt~Q----~~~rl----------------------------~~rF~~~v~v~HS~ls~  283 (731)
T Consensus       227 ~~l~~~~~~~~~~~LVF~~tR~~~e~~A~~la~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~~l~~GVafHHAGL~~  306 (717)
T PRK00254        227 EELVYDAVKRGKGALIFVNMRRKAEKTALELAKKIKNLLTKPELRELKELADSLEENPTNEKLAKALRGGVAFHHAGLGR  306 (717)
T ss_pred             HHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHCCCCCH
T ss_conf             89999999749981899955799999999999988763076889999999999873765189999997083121589998


Q ss_pred             HHHHHHHHHHHCCCCEEEEECCHH---HHHHHCCCEEEEEE
Q ss_conf             356678999971997399940012---11001000136774
Q gi|254780619|r  284 SMREKIWRQVARGAISVIVGVRSA---LFLPFKKLGLIVID  321 (731)
Q Consensus       284 ~eR~~~w~~i~~G~~~IVIGtRSA---if~P~~nLglIIvD  321 (731)
T Consensus       307 ~~R~lVE~~Fr~g~Ikvl~aTsTLA~GVNLPAr---~VIi~  344 (717)
T PRK00254        307 DERVLVEDNFRKGLIKVVVATPTLSAGINTPAF---RVIIR  344 (717)
T ss_pred             HHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCE---EEEEE
T ss_conf             899999999987995899816446504577605---99992