HHsearch alignment for GI: 254780619 and conserved domain: PRK00254
>PRK00254 ski2-like helicase; Provisional.
Probab=91.38 E-value=0.83 Score=25.27 Aligned_cols=83 Identities=20% Similarity=0.240 Sum_probs=55.1
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHH----HHHHH----------------------------HCCCCCEEEEEECCCCC
Q ss_conf 99999985146847997152100134----45554----------------------------30389768996235572
Q gi|254780619|r 236 LEIVAAVLHLGKQVLILLPEISLTSA----ILERF----------------------------QKRFGVKPAEWHSSLST 283 (731)
Q Consensus 236 l~li~~~L~~GkqvLiLvPEI~Lt~Q----~~~rl----------------------------~~rF~~~v~v~HS~ls~ 283 (731)
T Consensus 227 ~~l~~~~~~~~~~~LVF~~tR~~~e~~A~~la~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~~l~~GVafHHAGL~~ 306 (717)
T PRK00254 227 EELVYDAVKRGKGALIFVNMRRKAEKTALELAKKIKNLLTKPELRELKELADSLEENPTNEKLAKALRGGVAFHHAGLGR 306 (717)
T ss_pred HHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHCCCCCH
T ss_conf 89999999749981899955799999999999988763076889999999999873765189999997083121589998
Q ss_pred HHHHHHHHHHHCCCCEEEEECCHH---HHHHHCCCEEEEEE
Q ss_conf 356678999971997399940012---11001000136774
Q gi|254780619|r 284 SMREKIWRQVARGAISVIVGVRSA---LFLPFKKLGLIVID 321 (731)
Q Consensus 284 ~eR~~~w~~i~~G~~~IVIGtRSA---if~P~~nLglIIvD 321 (731)
T Consensus 307 ~~R~lVE~~Fr~g~Ikvl~aTsTLA~GVNLPAr---~VIi~ 344 (717)
T PRK00254 307 DERVLVEDNFRKGLIKVVVATPTLSAGINTPAF---RVIIR 344 (717)
T ss_pred HHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCE---EEEEE
T ss_conf 899999999987995899816446504577605---99992