HHsearch alignment for GI: 254780619 and conserved domain: PRK05582
>PRK05582 DNA topoisomerase I; Validated.
Probab=97.00 E-value=0.001 Score=47.59 Aligned_cols=40 Identities=33% Similarity=0.625 Sum_probs=22.3
Q ss_pred CCCCCCCEEEEECCC--C-CCEEC---HHHCC---CCCCCCCCCCCCCC
Q ss_conf 101465201211357--8-32000---02102---44655566678741
Q gi|254780619|r 447 KCLHCSCWLVEHRSK--K-KLYCH---QCGHS---AIYSQSCVVCGSSG 486 (731)
Q Consensus 447 ~C~~C~~~l~~h~~~--~-~l~Ch---~Cg~~---~~~~~~Cp~Cg~~~ 486 (731)
T Consensus 622 ~CP~C~~~l~~r~~k~gk~F~gCs~yp~C~~~~~~~p~~~~Cp~Cg~~~ 670 (692)
T PRK05582 622 KCPECGGKIVKRKSKKGKKFYGCSNYPKCNFISNYEPSNEKCPECGSYM 670 (692)
T ss_pred CCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 7999997747885489998997489999997738899999699998157