HHsearch alignment for GI: 254780619 and conserved domain: PRK05582

>PRK05582 DNA topoisomerase I; Validated.
Probab=97.00  E-value=0.001  Score=47.59  Aligned_cols=40  Identities=33%  Similarity=0.625  Sum_probs=22.3

Q ss_pred             CCCCCCCEEEEECCC--C-CCEEC---HHHCC---CCCCCCCCCCCCCC
Q ss_conf             101465201211357--8-32000---02102---44655566678741
Q gi|254780619|r  447 KCLHCSCWLVEHRSK--K-KLYCH---QCGHS---AIYSQSCVVCGSSG  486 (731)
Q Consensus       447 ~C~~C~~~l~~h~~~--~-~l~Ch---~Cg~~---~~~~~~Cp~Cg~~~  486 (731)
T Consensus       622 ~CP~C~~~l~~r~~k~gk~F~gCs~yp~C~~~~~~~p~~~~Cp~Cg~~~  670 (692)
T PRK05582        622 KCPECGGKIVKRKSKKGKKFYGCSNYPKCNFISNYEPSNEKCPECGSYM  670 (692)
T ss_pred             CCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             7999997747885489998997489999997738899999699998157