HHsearch alignment for GI: 254780619 and conserved domain: PRK05748
>PRK05748 replicative DNA helicase; Provisional.
Probab=94.05 E-value=0.54 Score=26.73 Aligned_cols=130 Identities=22% Similarity=0.247 Sum_probs=76.4
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHH-HHCCCCEEEEECCCHHHHHHHHHHHCCCC-CEEE-EEECCCCCHHHHHHHH--HH
Q ss_conf 619984475315799999999998-51468479971521001344555430389-7689-9623557235667899--99
Q gi|254780619|r 219 AVSLISGVTGSGKTEVYLEIVAAV-LHLGKQVLILLPEISLTSAILERFQKRFG-VKPA-EWHSSLSTSMREKIWR--QV 293 (731)
Q Consensus 219 ~~~LL~GvTGSGKTEVYl~li~~~-L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF~-~~v~-v~HS~ls~~eR~~~w~--~i 293 (731)
T Consensus 204 ~LiviaaRP~mGKTa~alnia~~~a~~~~~~v~~fSlEM~-~~~l~~R~la~~s~v~~~~i~~g~l~~~~~~~~~~a~~~ 282 (448)
T PRK05748 204 DLIIVAARPSVGKTAFALNIAQNVATKTDKNVAIFSLEMG-AESLVMRMLCAEGRIDQQKLRTGQLTDEDWPKLTIAVGS 282 (448)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC-HHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 3799984799876899999999999856980899817788-889999999997467777776289999999999999999
Q ss_pred HCCCCEEEEECCHHH-----------HHH-HCCCEEEEEEECCCCCCHHCCC-C------CCC-----HHHHHHHHHHHC
Q ss_conf 719973999400121-----------100-1000136774055321000024-4------322-----489999975110
Q gi|254780619|r 294 ARGAISVIVGVRSAL-----------FLP-FKKLGLIVIDEEHDISYKQEEG-I------LYN-----ARDMSIVRGKIE 349 (731)
Q Consensus 294 ~~G~~~IVIGtRSAi-----------f~P-~~nLglIIvDEEHd~sykq~~~-p------ry~-----aRdvA~~Ra~~~ 349 (731)
T Consensus 283 l~-~~~l~i~d~~~~ti~~i~~~~r~~~~~~~~~~~vviD------Ylqli~~~~~~~~~r~~ev~~isr~l-K~lAkel 354 (448)
T PRK05748 283 LS-DAPIYIDDTPGIKVTEIRARCRRLAQEHGGLGLIVID------YLQLIQGSGRSGENRQQEVSEISRSL-KALAKEL 354 (448)
T ss_pred HH-CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEE------HHHHCCCCCCCCCCHHHHHHHHHHHH-HHHHHHH
T ss_conf 86-5983785589886899999999999975998899971------68644777877643999999999999-9999996
Q ss_pred CCCEECCC
Q ss_conf 32100002
Q gi|254780619|r 350 SFPVVLVS 357 (731)
Q Consensus 350 ~~~lilgS 357 (731)
T Consensus 355 ~ipvi~ls 362 (448)
T PRK05748 355 KVPVIALS 362 (448)
T ss_pred CCCEEEEC
T ss_conf 99889970