HHsearch alignment for GI: 254780619 and conserved domain: PRK06904
>PRK06904 replicative DNA helicase; Validated.
Probab=95.56 E-value=0.23 Score=29.52 Aligned_cols=132 Identities=19% Similarity=0.232 Sum_probs=77.6
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHH-HHCCCCEEEEECCCHHHHHHHHHHHCCC-CCEEE-EEECC-CCCHH--HHHHHHH
Q ss_conf 619984475315799999999998-5146847997152100134455543038-97689-96235-57235--6678999
Q gi|254780619|r 219 AVSLISGVTGSGKTEVYLEIVAAV-LHLGKQVLILLPEISLTSAILERFQKRF-GVKPA-EWHSS-LSTSM--REKIWRQ 292 (731)
Q Consensus 219 ~~~LL~GvTGSGKTEVYl~li~~~-L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF-~~~v~-v~HS~-ls~~e--R~~~w~~ 292 (731)
T Consensus 222 ~LiViAaRPsmGKTa~alnia~n~A~~~~~~V~~fSLEM~-~~~l~~R~ls~~s~v~~~~i~~g~~l~~~e~~~~~~~~~ 300 (472)
T PRK06904 222 DLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMP-AEQIMMRMLASLSRVDQTKIRTGQNLDQQDWAKISSTVG 300 (472)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC-HHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 5799973798756899999999999955995799778799-999999999986499988864688560999999999999
Q ss_pred HHCCCCEEEEECCHHH------------HHHHCCCEEEEEEECCCCCCHHCC-CCCC-CHHH--HH------HHHHHHCC
Q ss_conf 9719973999400121------------100100013677405532100002-4432-2489--99------99751103
Q gi|254780619|r 293 VARGAISVIVGVRSAL------------FLPFKKLGLIVIDEEHDISYKQEE-GILY-NARD--MS------IVRGKIES 350 (731)
Q Consensus 293 i~~G~~~IVIGtRSAi------------f~P~~nLglIIvDEEHd~sykq~~-~pry-~aRd--vA------~~Ra~~~~ 350 (731)
T Consensus 301 ~l~~~~~l~idd~~~~t~~~i~~~~r~~~~~~~~l~~vvID------YLqL~~~~~~~~~r~~ei~~isr~LK~lAkel~ 374 (472)
T PRK06904 301 MFKQKPNLYIDDSSGLTPTELRSRARRVYRENGGLSLIMVD------YLQLMRAPGFEDNRTLEIAEISRSLKALAKELK 374 (472)
T ss_pred HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEE------HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 98468981684699999999999999999873899789963------886604888777788999999999999999979
Q ss_pred CCEECCC
Q ss_conf 2100002
Q gi|254780619|r 351 FPVVLVS 357 (731)
Q Consensus 351 ~~lilgS 357 (731)
T Consensus 375 ipvi~Ls 381 (472)
T PRK06904 375 VPVVALS 381 (472)
T ss_pred CCEEEEC
T ss_conf 9889973