HHsearch alignment for GI: 254780619 and conserved domain: PRK07004
>PRK07004 replicative DNA helicase; Provisional.
Probab=91.41 E-value=1.2 Score=24.15 Aligned_cols=131 Identities=21% Similarity=0.261 Sum_probs=76.1
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHH-HHCCCCEEEEECCCHHHHHHHHHHHCCCC-CEE-EEEECCCCCHHHHHHHHHHH-
Q ss_conf 619984475315799999999998-51468479971521001344555430389-768-99623557235667899997-
Q gi|254780619|r 219 AVSLISGVTGSGKTEVYLEIVAAV-LHLGKQVLILLPEISLTSAILERFQKRFG-VKP-AEWHSSLSTSMREKIWRQVA- 294 (731)
Q Consensus 219 ~~~LL~GvTGSGKTEVYl~li~~~-L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF~-~~v-~v~HS~ls~~eR~~~w~~i~- 294 (731)
T Consensus 214 dLiIIAARPsmGKTafAlniA~n~A~~~g~~V~~FSLEMs-~eql~~Rlls~~s~I~~~~ir~g~l~~~e~~~i~~a~~~ 292 (460)
T PRK07004 214 ELIIVAGRPSMGKTAFSMNIGEYVAVEYGLPVAVFSMEMP-GTQLAMRMLGSVGRLDQHRMRTGRLTDEDWPKLTHAVQK 292 (460)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC-HHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHH
T ss_conf 5799973687642699999999998725886699847799-999999999860698821100788999999999999999
Q ss_pred CCCCEEEEECCHH---------H--HHHH-CCCEEEEEEECCCCCCHHCCC------CCC-----CHHHHHHHHHHHCCC
Q ss_conf 1997399940012---------1--1001-000136774055321000024------432-----248999997511032
Q gi|254780619|r 295 RGAISVIVGVRSA---------L--FLPF-KKLGLIVIDEEHDISYKQEEG------ILY-----NARDMSIVRGKIESF 351 (731)
Q Consensus 295 ~G~~~IVIGtRSA---------i--f~P~-~nLglIIvDEEHd~sykq~~~------pry-----~aRdvA~~Ra~~~~~ 351 (731)
T Consensus 293 l~~~~l~IdD~~~lt~~~ira~~Rr~~~~~g~l~lvviD------Ylqli~~~~~~~~r~~ei~~isr~l-K~lAkel~i 365 (460)
T PRK07004 293 MSEAQLFIDETGGLNPMELRSRARRLARQCGKLGLIIID------YLQLMSGSSQGENRATEISEISRSL-KSLAKELDV 365 (460)
T ss_pred HHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEE------HHHHCCCCCCCCCHHHHHHHHHHHH-HHHHHHHCC
T ss_conf 855974896898730789999999999743588899850------7754478888888999999999999-999999699
Q ss_pred CEECCC
Q ss_conf 100002
Q gi|254780619|r 352 PVVLVS 357 (731)
Q Consensus 352 ~lilgS 357 (731)
T Consensus 366 pvi~ls 371 (460)
T PRK07004 366 PVIALS 371 (460)
T ss_pred CEEEEC
T ss_conf 789970